Click here to switch to the map view.

The map label for this gene is yjdI [H]

Identifier: 82750399

GI number: 82750399

Start: 710836

End: 711318

Strand: Direct

Name: yjdI [H]

Synonym: SAB0646

Alternate gene names: 82750399

Gene position: 710836-711318 (Clockwise)

Preceding gene: 82750398

Following gene: 82750400

Centisome position: 25.92

GC content: 35.4

Gene sequence:

>483_bases
ATGGCTAAAAATAAGAAAACGAACGCGATGCGTATGCTTGATCGTGCAAAAATTAAATACGAAGTTCATAGCTTTGAGGT
ACCAGAAGAACATTTATCTGGCCAAGAAGTCTCAGAACTCATACAAGCAAATGTTAAAACAGTATTTAAAACACTTGTTC
TAGAAAATACAAAACATGAACATTTTGTATTTGTTATCCCGGTAAGTGAAACTTTAGATATGAAAAAGGCAGCTGCTTTG
GTTGGAGAGAAGAAATTGCAACTTATGCCTTTAGATAATTTAAAAAATGTAACGGGATACATTCGTGGTGGGTGTTCACC
TGTTGGTATGAAAACATTGTTTCCAACAGTCGTTGACAAATCCTGTGAAAATTATAGTCATATCAGTGTGAGTGGTGGGC
TTCGAACAATGCAAATCACGATAGCTGTTGAGGATTTGATTACAATAACTGAAGGCAAAATTGGAGCAGTTATCCATGAA
TAA

Upstream 100 bases:

>100_bases
AACTTATAAAATGATGTAAATGTAATGTCAAAATCAACCAATCCGTAATGTATTTTAAAATGTTAATATAGTTCTGAAGA
AGTATAAATGAGGTGTTGAA

Downstream 100 bases:

>100_bases
TTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACT
CCTTTTTGATTGAATTAGTA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVSELIQANVKTVFKTLVLENTKHEHFVFVIPVSETLDMKKAAAL
VGEKKLQLMPLDNLKNVTGYIRGGCSPVGMKTLFPTVVDKSCENYSHISVSGGLRTMQITIAVEDLITITEGKIGAVIHE

Sequences:

>Translated_160_residues
MAKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVSELIQANVKTVFKTLVLENTKHEHFVFVIPVSETLDMKKAAAL
VGEKKLQLMPLDNLKNVTGYIRGGCSPVGMKTLFPTVVDKSCENYSHISVSGGLRTMQITIAVEDLITITEGKIGAVIHE
>Mature_159_residues
AKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVSELIQANVKTVFKTLVLENTKHEHFVFVIPVSETLDMKKAAALV
GEKKLQLMPLDNLKNVTGYIRGGCSPVGMKTLFPTVVDKSCENYSHISVSGGLRTMQITIAVEDLITITEGKIGAVIHE

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=154, Percent_Identity=35.7142857142857, Blast_Score=96, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17768; Mature: 17637

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVSELIQANVKTVFKTLVLENTKHE
CCCCCCHHHHHHHHHHHEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
HFVFVIPVSETLDMKKAAALVGEKKLQLMPLDNLKNVTGYIRGGCSPVGMKTLFPTVVDK
EEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHH
SCENYSHISVSGGLRTMQITIAVEDLITITEGKIGAVIHE
CCCCCCEEEECCCEEEEEEEEEEEHEEEECCCCEEEEEEC
>Mature Secondary Structure 
AKNKKTNAMRMLDRAKIKYEVHSFEVPEEHLSGQEVSELIQANVKTVFKTLVLENTKHE
CCCCCHHHHHHHHHHHEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
HFVFVIPVSETLDMKKAAALVGEKKLQLMPLDNLKNVTGYIRGGCSPVGMKTLFPTVVDK
EEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHH
SCENYSHISVSGGLRTMQITIAVEDLITITEGKIGAVIHE
CCCCCCEEEECCCEEEEEEEEEEEHEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]