| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is iaaA [H]
Identifier: 82703285
GI number: 82703285
Start: 2458554
End: 2459555
Strand: Reverse
Name: iaaA [H]
Synonym: Nmul_A2166
Alternate gene names: 82703285
Gene position: 2459555-2458554 (Counterclockwise)
Preceding gene: 82703286
Following gene: 82703284
Centisome position: 77.24
GC content: 59.08
Gene sequence:
>1002_bases ATGACGATACACATGCGCGGAAGCGCGGGGAATGATTCGCCGATCCGGCTCGTGATTCACGGAGGGGCCGGGAGCGTGAA ATCCGGGCAGGGGCCAGAACGCGAGCAGGCTTACAGGGAGGCACTCGCGCAATCGCTGATCGCTGGCCATGCGGTGCTTG CAGCAGGCGGCAACAGCATCGATGCAGTGATTGCGGCCATTACAGTGATGGAGGATTGCCCCTTGTTCAATGCCGGCAAG GGCGCCGTGCTGACCCATGATGGCCGCAACGAACTGGAAGCTTCAATCATGGAAGGGGCCACTCGCGCGGCAGGCGCCGT TGCGGGAGTGACGACGATTCGCAATCCGATTCGCGCCGCACATGCGGTAATGACGAAAAGCGCCCACGTGATGCTCATCG GGCAAGGTGCGGAAATTTTCGCTGCAAAGCAGGATCTGGAAATCGTGGATTCGTCCTATTTCTATACCCGGCACCGTTGG AATCAGCTGCAGAAAGCCATCGCTAAAGAAAGTATCCTGCTCGACCATGATGCGGGTCTGGATACATTGCCGGGTGAGGA TGAAAAACGTGGAACCGTTGGCGCAGTGGCGCTCGACTGCCAGGGCAATCTGGCGGCCGGCACGTCGACCGGTGGGCTCA CGAACAAGCACCCTGGCCGGGTAGGAGACTCGTCCATTATCGGGGCGGGAACCTACGCGGACAATCGCTCGGTTGCGGTA TCCACGACTGGTACAGGCGAAATGTTCATTCGTACCGCTGCCGCTTTCAACACAGCAGCGCAGGTGCGATTTCTGCATGC TCCGATTACTGCGGCAGCCGATAACACGCTGGAGGAAATCGCGGCGATAGGTGGAGATGGGGGCCTGATCGTCCTGGATG CGGACGGCAACTATGCGATACGGTTCAACACCGGCGCCATGTTTCGCGGCACAATTGGAGAGGATGGCATAGCACGGACA GGTATTTTTCCCGGGCCTGAAACACCAGCTCTGTCATGTTGA
Upstream 100 bases:
>100_bases GATTGGCGGATGGCAGTTGCGTCCGATCCCGTTCTCTACACTCTTCATGCAGGCACTGGCCGCATGACCGGTAATGTCGA TGCTCTGTAGATCTGTTTAG
Downstream 100 bases:
>100_bases CAAGCTGCCGCCTTCTGCGAGCCAAATATCGCTGCCGCGTATGAGGATGAACCGGTTACAGCAAAGAGGAGAAAGATAGC CTATACTTCGAGAGACAGAC
Product: peptidase T2, asparaginase 2
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MTIHMRGSAGNDSPIRLVIHGGAGSVKSGQGPEREQAYREALAQSLIAGHAVLAAGGNSIDAVIAAITVMEDCPLFNAGK GAVLTHDGRNELEASIMEGATRAAGAVAGVTTIRNPIRAAHAVMTKSAHVMLIGQGAEIFAAKQDLEIVDSSYFYTRHRW NQLQKAIAKESILLDHDAGLDTLPGEDEKRGTVGAVALDCQGNLAAGTSTGGLTNKHPGRVGDSSIIGAGTYADNRSVAV STTGTGEMFIRTAAAFNTAAQVRFLHAPITAAADNTLEEIAAIGGDGGLIVLDADGNYAIRFNTGAMFRGTIGEDGIART GIFPGPETPALSC
Sequences:
>Translated_333_residues MTIHMRGSAGNDSPIRLVIHGGAGSVKSGQGPEREQAYREALAQSLIAGHAVLAAGGNSIDAVIAAITVMEDCPLFNAGK GAVLTHDGRNELEASIMEGATRAAGAVAGVTTIRNPIRAAHAVMTKSAHVMLIGQGAEIFAAKQDLEIVDSSYFYTRHRW NQLQKAIAKESILLDHDAGLDTLPGEDEKRGTVGAVALDCQGNLAAGTSTGGLTNKHPGRVGDSSIIGAGTYADNRSVAV STTGTGEMFIRTAAAFNTAAQVRFLHAPITAAADNTLEEIAAIGGDGGLIVLDADGNYAIRFNTGAMFRGTIGEDGIART GIFPGPETPALSC >Mature_332_residues TIHMRGSAGNDSPIRLVIHGGAGSVKSGQGPEREQAYREALAQSLIAGHAVLAAGGNSIDAVIAAITVMEDCPLFNAGKG AVLTHDGRNELEASIMEGATRAAGAVAGVTTIRNPIRAAHAVMTKSAHVMLIGQGAEIFAAKQDLEIVDSSYFYTRHRWN QLQKAIAKESILLDHDAGLDTLPGEDEKRGTVGAVALDCQGNLAAGTSTGGLTNKHPGRVGDSSIIGAGTYADNRSVAVS TTGTGEMFIRTAAAFNTAAQVRFLHAPITAAADNTLEEIAAIGGDGGLIVLDADGNYAIRFNTGAMFRGTIGEDGIARTG IFPGPETPALSC
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=317, Percent_Identity=37.5394321766561, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI145275200, Length=317, Percent_Identity=37.5394321766561, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI98991769, Length=316, Percent_Identity=30.0632911392405, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI285002251, Length=279, Percent_Identity=29.7491039426523, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI285002253, Length=279, Percent_Identity=27.9569892473118, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI1787050, Length=296, Percent_Identity=50.3378378378378, Blast_Score=267, Evalue=7e-73, Organism=Caenorhabditis elegans, GI32564649, Length=207, Percent_Identity=29.4685990338164, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17569239, Length=300, Percent_Identity=26, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI18921183, Length=318, Percent_Identity=35.5345911949685, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI21357893, Length=281, Percent_Identity=30.2491103202847, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI221330102, Length=236, Percent_Identity=32.6271186440678, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24652135, Length=236, Percent_Identity=32.6271186440678, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI24655553, Length=276, Percent_Identity=28.2608695652174, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 34231; Mature: 34100
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHMRGSAGNDSPIRLVIHGGAGSVKSGQGPEREQAYREALAQSLIAGHAVLAAGGNSI CEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCH DAVIAAITVMEDCPLFNAGKGAVLTHDGRNELEASIMEGATRAAGAVAGVTTIRNPIRAA HHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HAVMTKSAHVMLIGQGAEIFAAKQDLEIVDSSYFYTRHRWNQLQKAIAKESILLDHDAGL HHHHHCCCEEEEEECCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCC DTLPGEDEKRGTVGAVALDCQGNLAAGTSTGGLTNKHPGRVGDSSIIGAGTYADNRSVAV CCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEE STTGTGEMFIRTAAAFNTAAQVRFLHAPITAAADNTLEEIAAIGGDGGLIVLDADGNYAI EECCCCCEEEEEHHHHCCHHEEEEEECCCHHHCCHHHHHHHHHCCCCCEEEEECCCCEEE RFNTGAMFRGTIGEDGIARTGIFPGPETPALSC EEECCEEEECCCCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure TIHMRGSAGNDSPIRLVIHGGAGSVKSGQGPEREQAYREALAQSLIAGHAVLAAGGNSI EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCH DAVIAAITVMEDCPLFNAGKGAVLTHDGRNELEASIMEGATRAAGAVAGVTTIRNPIRAA HHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HAVMTKSAHVMLIGQGAEIFAAKQDLEIVDSSYFYTRHRWNQLQKAIAKESILLDHDAGL HHHHHCCCEEEEEECCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCC DTLPGEDEKRGTVGAVALDCQGNLAAGTSTGGLTNKHPGRVGDSSIIGAGTYADNRSVAV CCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEE STTGTGEMFIRTAAAFNTAAQVRFLHAPITAAADNTLEEIAAIGGDGGLIVLDADGNYAI EECCCCCEEEEEHHHHCCHHEEEEEECCCHHHCCHHHHHHHHHCCCCCEEEEECCCCEEE RFNTGAMFRGTIGEDGIARTGIFPGPETPALSC EEECCEEEECCCCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]