Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
---|---|
Accession | NC_007614 |
Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is 82703228
Identifier: 82703228
GI number: 82703228
Start: 2406689
End: 2407903
Strand: Direct
Name: 82703228
Synonym: Nmul_A2109
Alternate gene names: NA
Gene position: 2406689-2407903 (Clockwise)
Preceding gene: 82703227
Following gene: 82703229
Centisome position: 75.58
GC content: 54.73
Gene sequence:
>1215_bases ATGAAAAAACTTCGCGTCCCTCATCGCACCAAGTCTGCGCGCGTGGTTCAGGAGCTGGTCCGCCTGGCTGCGGGACTTGC CGCCTCTGGCAGCCGCGTAGAAGACGCCTTCTGGGAGAATTGCCTTACCGCAAAAATACATGCCCAATTGCGAACGGGAG ACGATCAGAATCTCGAATCTGCACTGGATCAGCTTTATGACACTGATCCTGGAGGCTACAGTGAATTCATGTATGCCATC GAAGCCGCAATAGAATGCAGTATATTCACGCGAGGGAATCACACTTACGACGTTTTGATGCTTGCTGTACCGATGCTCAC CTGGTCGCGTTTTTCGATTCCCTCGGGACTAATAGCAGAATCCGTGCTTTCTGAACTTCGGGGGCAGTTGCAGGTGCAGG TGTTGGCGGACGATGCCCAGCTTGCGCTTGCAGATTGTCTTTTCAGCCCCGATCAATTGCCAAGAGGCTATCATCTTACA CATGAACTGGCTCGCAAACTCTGGTCGACGGCGGTGACCGGACAACGCGACTTGCATATGAACCCACGGCAGCTCCCTGA AACGGGACGATTTCTTTCTGATACCCGTTATCTCCTCGGCGGGATCGCGGTACCTCAGGGAAAACCCATGTTCCGCTGGC AGCAAGGCACTGCGGGCGAACACAAGGGCAGCAACGTTTCCGCTCTCCAGTTCTCCAAAGAGCAGATACTGCATGCATGG CAAACTCACGGTACTGCGGTGCTGCTGCCGCTATTCCAGGGCTGTGCGTTTGAGCTGCTGATGCCGGATGGCTTTTTTTC AGCATGGCGCGCCGCGGATCGTCTGGCGCGCCCCTATTCGGTGCGCGCCACGGTTGATTTTCTGGAAACCACTTTGGGTA TTTCCCCCGACAGATTGCGTGCAGTGATCGCGCCTTTCTATGATCAGTGGCTGGAGGAATACCGCATTGGATTCACCCTC AAGGATCGGGACAGCGTGCTCTACGGCATCATCTGGGGACTGGTAGGGGATGAGGATGAAAATACGGATAGTGTCGCTCA GATCGAGGCAGCGCTGCGGGAATGCGGAGTGACACAAACCATACTACTGCAGGAGCATTTTCTTTTGGAGTACTGCGAAG AATGCGGGGGACCCCTGTTTCCCAACGTGAATGGTGAAATCGTGCATGCAGAATTCCCGGAAGAAGGTGAAGTGGCCCCC ATACACCTGCATTGA
Upstream 100 bases:
>100_bases CCATAACGGATGAAATGTTTTCATCCTAAGTGCTTCAAAATATCAGGGAATTCAGGATTTAGGTTAAAATAATCCTTTAA CCATCCAGGACGCCAATTTG
Downstream 100 bases:
>100_bases GAGTGTTCATCATCTTATTCAGGAGCATCAATTTTTTCCGGAAGAGGAATTATGAACGACAAGCTTGTTAAATCCGACCA GGAATGGAAAAACCAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKKLRVPHRTKSARVVQELVRLAAGLAASGSRVEDAFWENCLTAKIHAQLRTGDDQNLESALDQLYDTDPGGYSEFMYAI EAAIECSIFTRGNHTYDVLMLAVPMLTWSRFSIPSGLIAESVLSELRGQLQVQVLADDAQLALADCLFSPDQLPRGYHLT HELARKLWSTAVTGQRDLHMNPRQLPETGRFLSDTRYLLGGIAVPQGKPMFRWQQGTAGEHKGSNVSALQFSKEQILHAW QTHGTAVLLPLFQGCAFELLMPDGFFSAWRAADRLARPYSVRATVDFLETTLGISPDRLRAVIAPFYDQWLEEYRIGFTL KDRDSVLYGIIWGLVGDEDENTDSVAQIEAALRECGVTQTILLQEHFLLEYCEECGGPLFPNVNGEIVHAEFPEEGEVAP IHLH
Sequences:
>Translated_404_residues MKKLRVPHRTKSARVVQELVRLAAGLAASGSRVEDAFWENCLTAKIHAQLRTGDDQNLESALDQLYDTDPGGYSEFMYAI EAAIECSIFTRGNHTYDVLMLAVPMLTWSRFSIPSGLIAESVLSELRGQLQVQVLADDAQLALADCLFSPDQLPRGYHLT HELARKLWSTAVTGQRDLHMNPRQLPETGRFLSDTRYLLGGIAVPQGKPMFRWQQGTAGEHKGSNVSALQFSKEQILHAW QTHGTAVLLPLFQGCAFELLMPDGFFSAWRAADRLARPYSVRATVDFLETTLGISPDRLRAVIAPFYDQWLEEYRIGFTL KDRDSVLYGIIWGLVGDEDENTDSVAQIEAALRECGVTQTILLQEHFLLEYCEECGGPLFPNVNGEIVHAEFPEEGEVAP IHLH >Mature_404_residues MKKLRVPHRTKSARVVQELVRLAAGLAASGSRVEDAFWENCLTAKIHAQLRTGDDQNLESALDQLYDTDPGGYSEFMYAI EAAIECSIFTRGNHTYDVLMLAVPMLTWSRFSIPSGLIAESVLSELRGQLQVQVLADDAQLALADCLFSPDQLPRGYHLT HELARKLWSTAVTGQRDLHMNPRQLPETGRFLSDTRYLLGGIAVPQGKPMFRWQQGTAGEHKGSNVSALQFSKEQILHAW QTHGTAVLLPLFQGCAFELLMPDGFFSAWRAADRLARPYSVRATVDFLETTLGISPDRLRAVIAPFYDQWLEEYRIGFTL KDRDSVLYGIIWGLVGDEDENTDSVAQIEAALRECGVTQTILLQEHFLLEYCEECGGPLFPNVNGEIVHAEFPEEGEVAP IHLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45158; Mature: 45158
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLRVPHRTKSARVVQELVRLAAGLAASGSRVEDAFWENCLTAKIHAQLRTGDDQNLES CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCHHH ALDQLYDTDPGGYSEFMYAIEAAIECSIFTRGNHTYDVLMLAVPMLTWSRFSIPSGLIAE HHHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHH SVLSELRGQLQVQVLADDAQLALADCLFSPDQLPRGYHLTHELARKLWSTAVTGQRDLHM HHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC NPRQLPETGRFLSDTRYLLGGIAVPQGKPMFRWQQGTAGEHKGSNVSALQFSKEQILHAW CHHHCCCCCCHHHHHHHHHCCEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH QTHGTAVLLPLFQGCAFELLMPDGFFSAWRAADRLARPYSVRATVDFLETTLGISPDRLR HHCCCEEEEHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHH AVIAPFYDQWLEEYRIGFTLKDRDSVLYGIIWGLVGDEDENTDSVAQIEAALRECGVTQT HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH ILLQEHFLLEYCEECGGPLFPNVNGEIVHAEFPEEGEVAPIHLH HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEC >Mature Secondary Structure MKKLRVPHRTKSARVVQELVRLAAGLAASGSRVEDAFWENCLTAKIHAQLRTGDDQNLES CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCHHH ALDQLYDTDPGGYSEFMYAIEAAIECSIFTRGNHTYDVLMLAVPMLTWSRFSIPSGLIAE HHHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHH SVLSELRGQLQVQVLADDAQLALADCLFSPDQLPRGYHLTHELARKLWSTAVTGQRDLHM HHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC NPRQLPETGRFLSDTRYLLGGIAVPQGKPMFRWQQGTAGEHKGSNVSALQFSKEQILHAW CHHHCCCCCCHHHHHHHHHCCEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH QTHGTAVLLPLFQGCAFELLMPDGFFSAWRAADRLARPYSVRATVDFLETTLGISPDRLR HHCCCEEEEHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHH AVIAPFYDQWLEEYRIGFTLKDRDSVLYGIIWGLVGDEDENTDSVAQIEAALRECGVTQT HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH ILLQEHFLLEYCEECGGPLFPNVNGEIVHAEFPEEGEVAPIHLH HHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA