Click here to switch to the map view.

The map label for this gene is ylbG [H]

Identifier: 82703215

GI number: 82703215

Start: 2386852

End: 2387895

Strand: Reverse

Name: ylbG [H]

Synonym: Nmul_A2096

Alternate gene names: 82703215

Gene position: 2387895-2386852 (Counterclockwise)

Preceding gene: 82703216

Following gene: 82703211

Centisome position: 74.99

GC content: 52.11

Gene sequence:

>1044_bases
ATGAGTAGTGTTCAACAAAATGTTATTAAGCACAAGGTAGGGCTGCTTAATCTGGCAGCCGAGCTTGGCAATGTATCGCG
TGCCTGCAAGGTGATGGGCTTTTCCCGGGATACCTTCTATCGGTATCAGTCAGCGATGGAAAATGGTGGTATCGATGCCC
TGATTGATGCCAATCGAAGGAAGCCCAATCCCAAGAATAGAGTTGAAGAAGCAGTCGAGATGGCGGTAGCTGCATTTGCC
CTTGAGCAGCCTGCATTCGGGCAAGTGCGCGTTTCCAACGAGTTACGCAAACGCGGCATCTTCATTTCTCCTTCAGGCGT
TCGCTCTGTCTGGCTGCGCAGGGACCTGGAATCATTCAAGAAGCGGTTGGCGGCACTGGAATGTCATATCGCGCAGACTG
GAGAAGTGCTGACCGAAGCGCAGGTTAGTGCCCTGGAGAAGAAGCAGGACGACGATGTCGCCCATGGGGAGGTGGAAACC
GCCCATTCAGGCTACCTTGGCAGTCAGGATACCTTCTATGTGGGCACGATCAAGGGCGTGGGTCGTATTTATCAGCAGAC
CTTCGTCGACACCTACTCCAAGTGGGCCACAGCCAAGCTCTATACGACCAAAACGCCGATTACAGGCGCGGATTTGCTCA
ACGATCGGGTACTACCCTTCTTTGCAGAACAGGACATGGGCCTGATCCGAATTCTGACCGACCGAGGCACTGAATATTGC
GGCAAGCCAGAGACTCACGATTATCAGCTCTATCTGGCGCTCAATGATATTGAACATACTCGCACCAAAGCCAATCATCC
GCAGACCAACGGCATCTGTGAGCGCTTTCACAAGACGATCCTGCAAGAGTTCTACCAGGTCGCGTTCCGGCGCAAGATAT
ACCGATCAATCGAGGAGTTGCAAATTGACCTGGATGACTGGCTGCACTACTACAATCACGACCGCACTCATCAGGGCAAG
ATGTGCTGCGGGCGAACACCCATGCAAACATTAATTGACGGAAAGGAGGTGTGGAACGATAAAATCACATTACTGAACAG
TTGA

Upstream 100 bases:

>100_bases
TAATCTGACAGTAGGGCCTTGCGAAAAGCGGGGTTACCCGGTTTGATAGAGGTGCGAATCTTTATCAAATTGAGCGCTGA
AAGCGCAAAGGAGTAACCCC

Downstream 100 bases:

>100_bases
ATCTGATCTGACAACTGCACCAGTCAAATCGGGAAACTGTCTGATGGGATCGCGACTACTACATCTGAGCGTAGGCTCCC
CTTTCCAACAAGGGTATAGG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSSVQQNVIKHKVGLLNLAAELGNVSRACKVMGFSRDTFYRYQSAMENGGIDALIDANRRKPNPKNRVEEAVEMAVAAFA
LEQPAFGQVRVSNELRKRGIFISPSGVRSVWLRRDLESFKKRLAALECHIAQTGEVLTEAQVSALEKKQDDDVAHGEVET
AHSGYLGSQDTFYVGTIKGVGRIYQQTFVDTYSKWATAKLYTTKTPITGADLLNDRVLPFFAEQDMGLIRILTDRGTEYC
GKPETHDYQLYLALNDIEHTRTKANHPQTNGICERFHKTILQEFYQVAFRRKIYRSIEELQIDLDDWLHYYNHDRTHQGK
MCCGRTPMQTLIDGKEVWNDKITLLNS

Sequences:

>Translated_347_residues
MSSVQQNVIKHKVGLLNLAAELGNVSRACKVMGFSRDTFYRYQSAMENGGIDALIDANRRKPNPKNRVEEAVEMAVAAFA
LEQPAFGQVRVSNELRKRGIFISPSGVRSVWLRRDLESFKKRLAALECHIAQTGEVLTEAQVSALEKKQDDDVAHGEVET
AHSGYLGSQDTFYVGTIKGVGRIYQQTFVDTYSKWATAKLYTTKTPITGADLLNDRVLPFFAEQDMGLIRILTDRGTEYC
GKPETHDYQLYLALNDIEHTRTKANHPQTNGICERFHKTILQEFYQVAFRRKIYRSIEELQIDLDDWLHYYNHDRTHQGK
MCCGRTPMQTLIDGKEVWNDKITLLNS
>Mature_346_residues
SSVQQNVIKHKVGLLNLAAELGNVSRACKVMGFSRDTFYRYQSAMENGGIDALIDANRRKPNPKNRVEEAVEMAVAAFAL
EQPAFGQVRVSNELRKRGIFISPSGVRSVWLRRDLESFKKRLAALECHIAQTGEVLTEAQVSALEKKQDDDVAHGEVETA
HSGYLGSQDTFYVGTIKGVGRIYQQTFVDTYSKWATAKLYTTKTPITGADLLNDRVLPFFAEQDMGLIRILTDRGTEYCG
KPETHDYQLYLALNDIEHTRTKANHPQTNGICERFHKTILQEFYQVAFRRKIYRSIEELQIDLDDWLHYYNHDRTHQGKM
CCGRTPMQTLIDGKEVWNDKITLLNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39559; Mature: 39428

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVQQNVIKHKVGLLNLAAELGNVSRACKVMGFSRDTFYRYQSAMENGGIDALIDANRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCC
KPNPKNRVEEAVEMAVAAFALEQPAFGQVRVSNELRKRGIFISPSGVRSVWLRRDLESFK
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCEEECCCHHHHHHHHHHHHHHH
KRLAALECHIAQTGEVLTEAQVSALEKKQDDDVAHGEVETAHSGYLGSQDTFYVGTIKGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHH
GRIYQQTFVDTYSKWATAKLYTTKTPITGADLLNDRVLPFFAEQDMGLIRILTDRGTEYC
HHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCCCEECCCCCCEEEEEECCCCCCC
GKPETHDYQLYLALNDIEHTRTKANHPQTNGICERFHKTILQEFYQVAFRRKIYRSIEEL
CCCCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIDLDDWLHYYNHDRTHQGKMCCGRTPMQTLIDGKEVWNDKITLLNS
HCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCHHHHCCCCEEEECC
>Mature Secondary Structure 
SSVQQNVIKHKVGLLNLAAELGNVSRACKVMGFSRDTFYRYQSAMENGGIDALIDANRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCC
KPNPKNRVEEAVEMAVAAFALEQPAFGQVRVSNELRKRGIFISPSGVRSVWLRRDLESFK
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCEEECCCHHHHHHHHHHHHHHH
KRLAALECHIAQTGEVLTEAQVSALEKKQDDDVAHGEVETAHSGYLGSQDTFYVGTIKGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHH
GRIYQQTFVDTYSKWATAKLYTTKTPITGADLLNDRVLPFFAEQDMGLIRILTDRGTEYC
HHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHCCCCCCEECCCCCCEEEEEECCCCCCC
GKPETHDYQLYLALNDIEHTRTKANHPQTNGICERFHKTILQEFYQVAFRRKIYRSIEEL
CCCCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIDLDDWLHYYNHDRTHQGKMCCGRTPMQTLIDGKEVWNDKITLLNS
HCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]