Click here to switch to the map view.

The map label for this gene is yfhR [C]

Identifier: 82703211

GI number: 82703211

Start: 2383728

End: 2384555

Strand: Reverse

Name: yfhR [C]

Synonym: Nmul_A2092

Alternate gene names: 82703211

Gene position: 2384555-2383728 (Counterclockwise)

Preceding gene: 82703215

Following gene: 82703210

Centisome position: 74.89

GC content: 53.74

Gene sequence:

>828_bases
ATGCGCATGCTGCTCAGCTTGGCCATCATGGCTGCACTTATCTATGTCGTTTTCGCGGCAGTGATATTCTTCGCCCAGCC
CAGTCTCGTTTATTATCCCGAAATCGGGCGTGGCATCACCGGGACTCCGGGTGAGTCGGGTCTCGCGTATGAGTCTGTGG
AACTGGAGACTGCGGATGGCGAAAGGCTGCATGGCTGGTTTGTCCCGGCATCTCATGCGAAAGCGACTGTCCTGTTTTTT
CACGGGAATGCGGGGAACATTTCCCAACGGATCGATTATTTGTCGATGTTTTACCGCCTGGGATATAACACCTTCATTTT
CGATTATCGCGGCTACGGCGAAAGTAGCGGTAAACCGACCGAGCAGGGGACATACCGGGATGCTGTTGCTGCATGGCGCT
ACATAACCGAAAAGAAGGCAATTCCGCCTGCCGATGTTGTGTTGTTCGGGGAATCTTTAGGGGGTGCAATCGCTTCCTGG
CTGGCCGCCCGCGAAATACCCGGTGTCCTGGTTCTGACTTCCGCGTTTACCTCGGTTCCTGACATGGGAGCGCAACTGTA
TCCCTATCTTCCCATTCGGCGGCTTTCCCGTTTCAAATACAACACTCTCGAGCATTTGAAGGATGTGAGCTGTCCCGTAT
TCATCGCGCACAGTCCTCAGGATGAAATTGTGCCGTTCAAGCAAGGGCAAGCCCTGTACGAGGCAGCACGCAATCCGAAG
CGATTCATTGAGCTGCAGGGCGGTCACAATGAGGGCTTCATTTACACCAGGGAAGACTGGGCGAAGGCTTTGGGTAAATT
CATAGATGCGAGCCTGGGAAGACATTGA

Upstream 100 bases:

>100_bases
GCTGACTCTGTCAAGATTCATTCTTGTTCCTGTTACTGTTCACTGAAAAATCGCTATTATAGCTGTCGGCTTCGGTGTTT
AACTGCGGATTAAACGATCC

Downstream 100 bases:

>100_bases
ATATGCTGGTATTGGCGCATCGTGGTTATCACGTGACAGCTCCGGAAAATACGCTCGAAGCTTTTGACGCAGCGATAATG
GCAGGGGTAAACGGTATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRMLLSLAIMAALIYVVFAAVIFFAQPSLVYYPEIGRGITGTPGESGLAYESVELETADGERLHGWFVPASHAKATVLFF
HGNAGNISQRIDYLSMFYRLGYNTFIFDYRGYGESSGKPTEQGTYRDAVAAWRYITEKKAIPPADVVLFGESLGGAIASW
LAAREIPGVLVLTSAFTSVPDMGAQLYPYLPIRRLSRFKYNTLEHLKDVSCPVFIAHSPQDEIVPFKQGQALYEAARNPK
RFIELQGGHNEGFIYTREDWAKALGKFIDASLGRH

Sequences:

>Translated_275_residues
MRMLLSLAIMAALIYVVFAAVIFFAQPSLVYYPEIGRGITGTPGESGLAYESVELETADGERLHGWFVPASHAKATVLFF
HGNAGNISQRIDYLSMFYRLGYNTFIFDYRGYGESSGKPTEQGTYRDAVAAWRYITEKKAIPPADVVLFGESLGGAIASW
LAAREIPGVLVLTSAFTSVPDMGAQLYPYLPIRRLSRFKYNTLEHLKDVSCPVFIAHSPQDEIVPFKQGQALYEAARNPK
RFIELQGGHNEGFIYTREDWAKALGKFIDASLGRH
>Mature_275_residues
MRMLLSLAIMAALIYVVFAAVIFFAQPSLVYYPEIGRGITGTPGESGLAYESVELETADGERLHGWFVPASHAKATVLFF
HGNAGNISQRIDYLSMFYRLGYNTFIFDYRGYGESSGKPTEQGTYRDAVAAWRYITEKKAIPPADVVLFGESLGGAIASW
LAAREIPGVLVLTSAFTSVPDMGAQLYPYLPIRRLSRFKYNTLEHLKDVSCPVFIAHSPQDEIVPFKQGQALYEAARNPK
RFIELQGGHNEGFIYTREDWAKALGKFIDASLGRH

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.pombe bem46 and yeast YNL320w [H]

Homologues:

Organism=Homo sapiens, GI71051602, Length=228, Percent_Identity=32.4561403508772, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI71051600, Length=228, Percent_Identity=32.4561403508772, Blast_Score=116, Evalue=2e-26,
Organism=Homo sapiens, GI49355781, Length=272, Percent_Identity=30.8823529411765, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI194306564, Length=258, Percent_Identity=31.7829457364341, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI151301175, Length=220, Percent_Identity=31.3636363636364, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI194306562, Length=205, Percent_Identity=34.1463414634146, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI109689718, Length=229, Percent_Identity=29.6943231441048, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI24308097, Length=191, Percent_Identity=31.9371727748691, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI32451492, Length=214, Percent_Identity=28.9719626168224, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI32528310, Length=214, Percent_Identity=28.9719626168224, Blast_Score=85, Evalue=8e-17,
Organism=Escherichia coli, GI226510965, Length=265, Percent_Identity=32.0754716981132, Blast_Score=125, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71988362, Length=203, Percent_Identity=30.0492610837438, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17566318, Length=192, Percent_Identity=28.6458333333333, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17532877, Length=177, Percent_Identity=31.638418079096, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324009, Length=250, Percent_Identity=32, Blast_Score=108, Evalue=1e-24,
Organism=Drosophila melanogaster, GI17137566, Length=282, Percent_Identity=31.9148936170213, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281362521, Length=222, Percent_Identity=31.5315315315315, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI281362519, Length=222, Percent_Identity=31.5315315315315, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28571878, Length=222, Percent_Identity=31.5315315315315, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24655464, Length=184, Percent_Identity=31.5217391304348, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24655467, Length=184, Percent_Identity=31.5217391304348, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 30592; Mature: 30592

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMLLSLAIMAALIYVVFAAVIFFAQPSLVYYPEIGRGITGTPGESGLAYESVELETADG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCC
ERLHGWFVPASHAKATVLFFHGNAGNISQRIDYLSMFYRLGYNTFIFDYRGYGESSGKPT
CEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
EQGTYRDAVAAWRYITEKKAIPPADVVLFGESLGGAIASWLAAREIPGVLVLTSAFTSVP
CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEHHHHCCC
DMGAQLYPYLPIRRLSRFKYNTLEHLKDVSCPVFIAHSPQDEIVPFKQGQALYEAARNPK
CCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCC
RFIELQGGHNEGFIYTREDWAKALGKFIDASLGRH
EEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRMLLSLAIMAALIYVVFAAVIFFAQPSLVYYPEIGRGITGTPGESGLAYESVELETADG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCC
ERLHGWFVPASHAKATVLFFHGNAGNISQRIDYLSMFYRLGYNTFIFDYRGYGESSGKPT
CEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
EQGTYRDAVAAWRYITEKKAIPPADVVLFGESLGGAIASWLAAREIPGVLVLTSAFTSVP
CCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEHHHHCCC
DMGAQLYPYLPIRRLSRFKYNTLEHLKDVSCPVFIAHSPQDEIVPFKQGQALYEAARNPK
CCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCC
RFIELQGGHNEGFIYTREDWAKALGKFIDASLGRH
EEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]