Click here to switch to the map view.

The map label for this gene is lcrS [H]

Identifier: 82703132

GI number: 82703132

Start: 2309857

End: 2310135

Strand: Reverse

Name: lcrS [H]

Synonym: Nmul_A2011

Alternate gene names: 82703132

Gene position: 2310135-2309857 (Counterclockwise)

Preceding gene: 82703133

Following gene: 82703131

Centisome position: 72.55

GC content: 58.06

Gene sequence:

>279_bases
ATGAAGAAGAAGCGGTTTTCAATAGAACAGATCGTAGCGGTATTAAAGCAGGCGGAGCTTGGGATGCCGGTGGCGGATCT
GATCCGGCAGGTGGGAATCTCGGAACAGACGTTCTACCGCTGGAAGAAGCAGTACGCGGGGATGCAGTCGGATCAGGTGC
GGGAGCTCAAGCAACTGCAGGAAGAGAACGGGCGGCTCAAGAAGCTGGTTGCCGAGTTGAGCCTGGACCGGGCGATCCTG
CAGGACGTTGCATCAAAAAAGTGGCCCGGCCCGCGCTGA

Upstream 100 bases:

>100_bases
ATTGCGTTAGCAGTATCAGGGTGATCTGCTTTAGGAATTCAGGACCAGACAGAAAGTGAGTTTTTCGGCAAACTTGACCT
TGAAAGGAGGGGTGTTTGCC

Downstream 100 bases:

>100_bases
AACGCGAAGTGGTGGACTACATCGTGAGCCACCATGACCTGAACATGCGGCGGGCCTGCAGGTTGATGAAGCAATCGCGC
AGCGTCCAGTACTATCGGAG

Product: transposase IS3/IS911

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKKKRFSIEQIVAVLKQAELGMPVADLIRQVGISEQTFYRWKKQYAGMQSDQVRELKQLQEENGRLKKLVAELSLDRAIL
QDVASKKWPGPR

Sequences:

>Translated_92_residues
MKKKRFSIEQIVAVLKQAELGMPVADLIRQVGISEQTFYRWKKQYAGMQSDQVRELKQLQEENGRLKKLVAELSLDRAIL
QDVASKKWPGPR
>Mature_92_residues
MKKKRFSIEQIVAVLKQAELGMPVADLIRQVGISEQTFYRWKKQYAGMQSDQVRELKQLQEENGRLKKLVAELSLDRAIL
QDVASKKWPGPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10670; Mature: 10670

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKRFSIEQIVAVLKQAELGMPVADLIRQVGISEQTFYRWKKQYAGMQSDQVRELKQLQ
CCCCHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
EENGRLKKLVAELSLDRAILQDVASKKWPGPR
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKKRFSIEQIVAVLKQAELGMPVADLIRQVGISEQTFYRWKKQYAGMQSDQVRELKQLQ
CCCCHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
EENGRLKKLVAELSLDRAILQDVASKKWPGPR
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]