| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is cyp18 [H]
Identifier: 82703005
GI number: 82703005
Start: 2170572
End: 2171195
Strand: Direct
Name: cyp18 [H]
Synonym: Nmul_A1884
Alternate gene names: 82703005
Gene position: 2170572-2171195 (Clockwise)
Preceding gene: 82703004
Following gene: 82703006
Centisome position: 68.17
GC content: 50.0
Gene sequence:
>624_bases ATGCATATTTTCAAAGTTTTCTCAGTCCTTGCGCTCTCTTTCAGCTTCACCGCTCTTGCCGCGAATTCACCGACAAGCCA TCCGCAAGTTGAAATAAAAACCAATCTCGGTAAAGTGGTACTGGAACTCTATCCCGACAAGGCGCCAAAAACCGTCGAAA ATTTTTTGCACTATGTGAACGACGGGCACTACACCGGCACCATATTCCATCGTGTTATCCCGGGATTCATGATCCAGGGT GGCGGATTCGACAAGACTTTCAAGCAGAAATCTACGAGACCACCTGTTGAGAACGAGGCCGGAAACGGCCTCAAGAATGA GATTGGAACAGTTGCAATGGCGCGTACCACAGACCCTCACTCAGCCACCGCACAGTTTTTTATCAATGTGGCCAATAACA CATTTCTCAATCAAACCTCGCCTACTCCGCGCGGTTATGGCTATACCGTATTCGGCAAGGTCATCGAGGGAATGGACGTG GTCAACAGGATCGCAGCTGTTCCCACCGGTTCCGGCGGACCATTCTCCACCGATGTGCCGAAGGAAACCATAGTAATCGA GGAAATGAGACTTATTGCAAACCCGTCTCTCGCCTCTCCCACCCATCCACAAAACAGGGATTGA
Upstream 100 bases:
>100_bases TTCACCCCATGCCGTTCCAGGATAGTCCGGGCAGGAACCGGCAGGTACAGGAACGGATAATTCTTCCACTCTTATCACTC TTATTATTACGGTCAAGCTA
Downstream 100 bases:
>100_bases TATGATCAGACTGCAAACGAACTACGGCGACATCATGCTCGAACTCGATCACGAAAAAGCACCGGTAACTGTCCAGAATT TTATAGACTATGTAAATAGC
Product: peptidylprolyl isomerase
Products: NA
Alternate protein names: PPIase cyp18; SanCyp18; Rotamase cyp18 [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MHIFKVFSVLALSFSFTALAANSPTSHPQVEIKTNLGKVVLELYPDKAPKTVENFLHYVNDGHYTGTIFHRVIPGFMIQG GGFDKTFKQKSTRPPVENEAGNGLKNEIGTVAMARTTDPHSATAQFFINVANNTFLNQTSPTPRGYGYTVFGKVIEGMDV VNRIAAVPTGSGGPFSTDVPKETIVIEEMRLIANPSLASPTHPQNRD
Sequences:
>Translated_207_residues MHIFKVFSVLALSFSFTALAANSPTSHPQVEIKTNLGKVVLELYPDKAPKTVENFLHYVNDGHYTGTIFHRVIPGFMIQG GGFDKTFKQKSTRPPVENEAGNGLKNEIGTVAMARTTDPHSATAQFFINVANNTFLNQTSPTPRGYGYTVFGKVIEGMDV VNRIAAVPTGSGGPFSTDVPKETIVIEEMRLIANPSLASPTHPQNRD >Mature_207_residues MHIFKVFSVLALSFSFTALAANSPTSHPQVEIKTNLGKVVLELYPDKAPKTVENFLHYVNDGHYTGTIFHRVIPGFMIQG GGFDKTFKQKSTRPPVENEAGNGLKNEIGTVAMARTTDPHSATAQFFINVANNTFLNQTSPTPRGYGYTVFGKVIEGMDV VNRIAAVPTGSGGPFSTDVPKETIVIEEMRLIANPSLASPTHPQNRD
Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides [H]
COG id: COG0652
COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase cyclophilin-type domain [H]
Homologues:
Organism=Homo sapiens, GI7706339, Length=158, Percent_Identity=37.3417721518987, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI19557636, Length=174, Percent_Identity=31.6091954022989, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI22547212, Length=175, Percent_Identity=32, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI7657473, Length=175, Percent_Identity=32, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI22547215, Length=175, Percent_Identity=32, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI5454154, Length=165, Percent_Identity=33.9393939393939, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI24308049, Length=158, Percent_Identity=34.8101265822785, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI10863927, Length=146, Percent_Identity=36.3013698630137, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI64276486, Length=140, Percent_Identity=32.8571428571429, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI310110104, Length=135, Percent_Identity=38.5185185185185, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI310129267, Length=149, Percent_Identity=34.8993288590604, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI310120620, Length=149, Percent_Identity=34.8993288590604, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI5031987, Length=146, Percent_Identity=38.3561643835616, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI310127646, Length=133, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI310114371, Length=133, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI310119221, Length=133, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786736, Length=160, Percent_Identity=57.5, Blast_Score=192, Evalue=1e-50, Organism=Escherichia coli, GI1789763, Length=193, Percent_Identity=49.740932642487, Blast_Score=185, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71980590, Length=143, Percent_Identity=38.4615384615385, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71980594, Length=143, Percent_Identity=38.4615384615385, Blast_Score=83, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17552780, Length=195, Percent_Identity=34.8717948717949, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17539496, Length=175, Percent_Identity=34.8571428571429, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17552782, Length=165, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17532641, Length=174, Percent_Identity=29.8850574712644, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17566266, Length=167, Percent_Identity=31.1377245508982, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17539498, Length=170, Percent_Identity=33.5294117647059, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17565860, Length=159, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17559074, Length=165, Percent_Identity=32.1212121212121, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17506311, Length=163, Percent_Identity=33.7423312883436, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17532643, Length=176, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323562, Length=162, Percent_Identity=37.037037037037, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320510, Length=220, Percent_Identity=30.4545454545455, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320359, Length=158, Percent_Identity=32.9113924050633, Blast_Score=68, Evalue=8e-13, Organism=Drosophila melanogaster, GI17986117, Length=145, Percent_Identity=33.7931034482759, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI19922376, Length=173, Percent_Identity=28.3236994219653, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI45549139, Length=157, Percent_Identity=33.1210191082803, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24652460, Length=142, Percent_Identity=32.3943661971831, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24664125, Length=148, Percent_Identity=35.8108108108108, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357783, Length=148, Percent_Identity=35.8108108108108, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24586038, Length=168, Percent_Identity=30.952380952381, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136360, Length=192, Percent_Identity=31.25, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17647301, Length=168, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922912, Length=174, Percent_Identity=32.7586206896552, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24661775, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355237, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24661771, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: 780 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015891 - InterPro: IPR020892 - InterPro: IPR002130 [H]
Pfam domain/function: PF00160 Pro_isomerase [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 22521; Mature: 22521
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00170 CSA_PPIASE_1 ; PS50072 CSA_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIFKVFSVLALSFSFTALAANSPTSHPQVEIKTNLGKVVLELYPDKAPKTVENFLHYVN CHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCEEEHEECCCCCHHHHHHHHHHHC DGHYTGTIFHRVIPGFMIQGGGFDKTFKQKSTRPPVENEAGNGLKNEIGTVAMARTTDPH CCCCHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHCEEEEEECCCCC SATAQFFINVANNTFLNQTSPTPRGYGYTVFGKVIEGMDVVNRIAAVPTGSGGPFSTDVP CCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC KETIVIEEMRLIANPSLASPTHPQNRD CHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MHIFKVFSVLALSFSFTALAANSPTSHPQVEIKTNLGKVVLELYPDKAPKTVENFLHYVN CHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCEEEHEECCCCCHHHHHHHHHHHC DGHYTGTIFHRVIPGFMIQGGGFDKTFKQKSTRPPVENEAGNGLKNEIGTVAMARTTDPH CCCCHHHHHHHHHCCEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHCEEEEEECCCCC SATAQFFINVANNTFLNQTSPTPRGYGYTVFGKVIEGMDVVNRIAAVPTGSGGPFSTDVP CCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC KETIVIEEMRLIANPSLASPTHPQNRD CHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10400660 [H]