| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is hldE [H]
Identifier: 82702915
GI number: 82702915
Start: 2043462
End: 2044937
Strand: Reverse
Name: hldE [H]
Synonym: Nmul_A1792
Alternate gene names: 82702915
Gene position: 2044937-2043462 (Counterclockwise)
Preceding gene: 82702916
Following gene: 82702914
Centisome position: 64.22
GC content: 53.46
Gene sequence:
>1476_bases ATGAACAGCAGTTATCTTGCCACTATCGATCGCTTTAGCGGTTTGAATGTACTTGTAATCGGCGATGCGATGCTCGATGT TTATCTCGACGGGGCGGCAAACCGTATCTGCAGGGAAGCGCCTGTTCCCATCGTGGATATCAGGGATGTCAAGGCAGTGC CGGGAGGAGCGGCTAATACGGCAGTAAATCTGGCACAACTGGGTGCCACAGTCCACTATCTTTCGGTTGTCGGATGTGAT CACGAGGCCGAGTTGCTGAAAGAATCGCTCGTCAGTCATGGCCTCGACATTTCCCTGGTTATCTGCGATCCGGCCCGTCG AACGCTTACCAAACAGCGTGTCGCCGCAGGTACCCAACTGCTGGTGCGTTTTGATGCCGGCACGACAGAGCGGGTATGCA ACAAGCACGAGCAGCAGATGATCGATACCCTGAACGAAAAGTTTCATGAGATGGATGCTGTCGTTGTTTCCGATTATGGT TATGGCATTCTCACGGACCCAGTGATCGATGCTCTGCGTGCTTTGCAGAAAAAAAAGGAAAACACTCTGGTAATCGACGC AAAATCGCTCGATAAATACAGCCGGGTTGGGGCGACCGTGGCCAAGCCGAACTATCAGGAACTCGTCACGCTGCTTGCCA TCACGGAACCGGCGCCTGTGGGCCAGCGTTCGGAGCAGATCAGGCTCTACGGACAAAAGCTGCTCAAAAAAACCGGAACG AAATATGTTGCGGCTACCATCGATGTCGAAGGCGCATTGCTGTTTCAGCACGGCAAGGAGCCTTATCGCACCTTCTCCAA ACCGGTAGAGAACACCCGGGCAGCCGGAGCAGGGGATACCTATGCAGGCGCGCTCACGCTGGCTCTCGCCAGCGGATCAT CTATTGAGGTGGCGGGTGAGATTGCCAAGTCTGCCGCGATGGTGATACTTCAAAAATCCCACACCGCCACCTGCACTCAG AACGAACTGCGGCATTACCTGGGAAGCAGCAGTAAATATGTCGCGGACTGGCAAGCCCTGGATAATCGTCTGGATGCGTT CAGAAAAGAAGGCAAGCGCATCGTGTTTACCAACGGGTGCTTCGACCTCCTTCATAGCGGCCATGTCAGCTATCTCGAGC AAGCACGGGCTCTGGGTGACGTTCTGGTGCTCGGCCTCAATTCCGATGCGAGTATAAAACGTCTGAAGGGGAGCAATCGC CCCATCAACAACCTGTATGAACGTATCCGCATCCTCTCGGGATTGGAGTCGGTAACACTCATGACGTCATTCGAAGAAGA CACGCCGGTCAATCTTCTCGAAGTCATTCAGCCAAGTTTGTATGTAAAAGGCGGTGACTATACGATCGAAACGCTTCCCG AAGCGCCGGTTGTCCGGGCATACGGCGGAAAAGTGGAAATCATGCCTTTTGTTCAGGACCGATCCACGACAAACATCATA TCCAGGATCAAAAGCATGGACAAACAGGTTGCCTAG
Upstream 100 bases:
>100_bases GCACACTGCTGATACTGGCAGTTTTCCCGATTGCTCCCTGGAATTTGCTTTGACCCCGTATAGCTTGCAGGGCGACATAT TCCAGGTAAAAGGAGGCAGC
Downstream 100 bases:
>100_bases GCCGGAAAATCAAAATGTTTGCCGGAGCCTGGAAAAATTACAGGAACATATTATGCGTTCGCCCGGACAACATGGGCGAT GTGCTGATGAGCCAGCCGGC
Product: bifunctional ADP-heptose synthase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MNSSYLATIDRFSGLNVLVIGDAMLDVYLDGAANRICREAPVPIVDIRDVKAVPGGAANTAVNLAQLGATVHYLSVVGCD HEAELLKESLVSHGLDISLVICDPARRTLTKQRVAAGTQLLVRFDAGTTERVCNKHEQQMIDTLNEKFHEMDAVVVSDYG YGILTDPVIDALRALQKKKENTLVIDAKSLDKYSRVGATVAKPNYQELVTLLAITEPAPVGQRSEQIRLYGQKLLKKTGT KYVAATIDVEGALLFQHGKEPYRTFSKPVENTRAAGAGDTYAGALTLALASGSSIEVAGEIAKSAAMVILQKSHTATCTQ NELRHYLGSSSKYVADWQALDNRLDAFRKEGKRIVFTNGCFDLLHSGHVSYLEQARALGDVLVLGLNSDASIKRLKGSNR PINNLYERIRILSGLESVTLMTSFEEDTPVNLLEVIQPSLYVKGGDYTIETLPEAPVVRAYGGKVEIMPFVQDRSTTNII SRIKSMDKQVA
Sequences:
>Translated_491_residues MNSSYLATIDRFSGLNVLVIGDAMLDVYLDGAANRICREAPVPIVDIRDVKAVPGGAANTAVNLAQLGATVHYLSVVGCD HEAELLKESLVSHGLDISLVICDPARRTLTKQRVAAGTQLLVRFDAGTTERVCNKHEQQMIDTLNEKFHEMDAVVVSDYG YGILTDPVIDALRALQKKKENTLVIDAKSLDKYSRVGATVAKPNYQELVTLLAITEPAPVGQRSEQIRLYGQKLLKKTGT KYVAATIDVEGALLFQHGKEPYRTFSKPVENTRAAGAGDTYAGALTLALASGSSIEVAGEIAKSAAMVILQKSHTATCTQ NELRHYLGSSSKYVADWQALDNRLDAFRKEGKRIVFTNGCFDLLHSGHVSYLEQARALGDVLVLGLNSDASIKRLKGSNR PINNLYERIRILSGLESVTLMTSFEEDTPVNLLEVIQPSLYVKGGDYTIETLPEAPVVRAYGGKVEIMPFVQDRSTTNII SRIKSMDKQVA >Mature_491_residues MNSSYLATIDRFSGLNVLVIGDAMLDVYLDGAANRICREAPVPIVDIRDVKAVPGGAANTAVNLAQLGATVHYLSVVGCD HEAELLKESLVSHGLDISLVICDPARRTLTKQRVAAGTQLLVRFDAGTTERVCNKHEQQMIDTLNEKFHEMDAVVVSDYG YGILTDPVIDALRALQKKKENTLVIDAKSLDKYSRVGATVAKPNYQELVTLLAITEPAPVGQRSEQIRLYGQKLLKKTGT KYVAATIDVEGALLFQHGKEPYRTFSKPVENTRAAGAGDTYAGALTLALASGSSIEVAGEIAKSAAMVILQKSHTATCTQ NELRHYLGSSSKYVADWQALDNRLDAFRKEGKRIVFTNGCFDLLHSGHVSYLEQARALGDVLVLGLNSDASIKRLKGSNR PINNLYERIRILSGLESVTLMTSFEEDTPVNLLEVIQPSLYVKGGDYTIETLPEAPVVRAYGGKVEIMPFVQDRSTTNII SRIKSMDKQVA
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=488, Percent_Identity=37.9098360655738, Blast_Score=281, Evalue=5e-77, Organism=Caenorhabditis elegans, GI193203447, Length=61, Percent_Identity=42.6229508196721, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17509873, Length=61, Percent_Identity=42.6229508196721, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI19921220, Length=59, Percent_Identity=50.8474576271186, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI45550975, Length=59, Percent_Identity=50.8474576271186, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI45550973, Length=59, Percent_Identity=50.8474576271186, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI45550974, Length=59, Percent_Identity=50.8474576271186, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.-
Molecular weight: Translated: 53512; Mature: 53512
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSYLATIDRFSGLNVLVIGDAMLDVYLDGAANRICREAPVPIVDIRDVKAVPGGAANT CCCCEEEEHHHCCCCEEEEEECCEEEHEECCHHHHHHHHCCCCEEECCCCCCCCCCCCHH AVNLAQLGATVHYLSVVGCDHEAELLKESLVSHGLDISLVICDPARRTLTKQRVAAGTQL HHHHHHHHHHHEEHHEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEE LVRFDAGTTERVCNKHEQQMIDTLNEKFHEMDAVVVSDYGYGILTDPVIDALRALQKKKE EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHCCC NTLVIDAKSLDKYSRVGATVAKPNYQELVTLLAITEPAPVGQRSEQIRLYGQKLLKKTGT CEEEEEHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC KYVAATIDVEGALLFQHGKEPYRTFSKPVENTRAAGAGDTYAGALTLALASGSSIEVAGE EEEEEEEECCCEEEECCCCCHHHHHHCCHHHCCCCCCCCCHHHEEEEEEECCCCEEHHHH IAKSAAMVILQKSHTATCTQNELRHYLGSSSKYVADWQALDNRLDAFRKEGKRIVFTNGC HHHHHEEEEEECCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCEEEEECCH FDLLHSGHVSYLEQARALGDVLVLGLNSDASIKRLKGSNRPINNLYERIRILSGLESVTL HHHHHCCCHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEE MTSFEEDTPVNLLEVIQPSLYVKGGDYTIETLPEAPVVRAYGGKVEIMPFVQDRSTTNII EECCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHH SRIKSMDKQVA HHHHHHHHCCC >Mature Secondary Structure MNSSYLATIDRFSGLNVLVIGDAMLDVYLDGAANRICREAPVPIVDIRDVKAVPGGAANT CCCCEEEEHHHCCCCEEEEEECCEEEHEECCHHHHHHHHCCCCEEECCCCCCCCCCCCHH AVNLAQLGATVHYLSVVGCDHEAELLKESLVSHGLDISLVICDPARRTLTKQRVAAGTQL HHHHHHHHHHHEEHHEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEE LVRFDAGTTERVCNKHEQQMIDTLNEKFHEMDAVVVSDYGYGILTDPVIDALRALQKKKE EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHCCC NTLVIDAKSLDKYSRVGATVAKPNYQELVTLLAITEPAPVGQRSEQIRLYGQKLLKKTGT CEEEEEHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC KYVAATIDVEGALLFQHGKEPYRTFSKPVENTRAAGAGDTYAGALTLALASGSSIEVAGE EEEEEEEECCCEEEECCCCCHHHHHHCCHHHCCCCCCCCCHHHEEEEEEECCCCEEHHHH IAKSAAMVILQKSHTATCTQNELRHYLGSSSKYVADWQALDNRLDAFRKEGKRIVFTNGC HHHHHEEEEEECCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCEEEEECCH FDLLHSGHVSYLEQARALGDVLVLGLNSDASIKRLKGSNRPINNLYERIRILSGLESVTL HHHHHCCCHHHHHHHHHHCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEE MTSFEEDTPVNLLEVIQPSLYVKGGDYTIETLPEAPVVRAYGGKVEIMPFVQDRSTTNII EECCCCCCCCHHHHHCCCCEEEECCCEEEEECCCCCEEEECCCEEEEEEECCCCCHHHHH SRIKSMDKQVA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA