| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is yjeB [C]
Identifier: 82702897
GI number: 82702897
Start: 2027407
End: 2027877
Strand: Reverse
Name: yjeB [C]
Synonym: Nmul_A1774
Alternate gene names: 82702897
Gene position: 2027877-2027407 (Counterclockwise)
Preceding gene: 82702898
Following gene: 82702896
Centisome position: 63.68
GC content: 53.72
Gene sequence:
>471_bases ATGATTCTTTCGCGTACGACCCAATATGCCATTCAGGCCCTCATCTACATGGCAACCCAGCCTCCCGGGGTGGCTGTGCT GAATCGCACAATAGCGGAATGCCTGAGGTCGCCGCCTACTTATCTCGCAAAGATTCTGCAGGAGTTATGCAAGGGCAACC TTTTGTATTCTTTTCGTGGAAAGCAGGGGGGGTTTTGCTTGCGGGAAAGCAGTGACAAGATTAACCTGATGCAGATCGTC AGGATCACCGAGGGCCCGGGATTTACGGAGGATTGTGTTCTGGGGCTGAAAGTTTGCAGCGACACCACCGCTTGTCCCAT GCACGCAAAATGGTGGCCGATCAAGCAGGAAATCGTGAAACTTCTGCAAGGCCAGACGCTGGATACCTTGGCTGCGATGG TGGTAAGCGGCAAGTATCAGTTAACGGATTTTCCCGGAGCGGTTCTCGGCAACATCGAGCTGCCGGCATAG
Upstream 100 bases:
>100_bases GACGTGGTCTGGCTGGGCCTGTTCATATTTGTTTACTGGCTGATATAGGAATTGGTCTTAAAAAAGTTCTAAATATTCAC CGTATTTTCTCCGGTTCCCG
Downstream 100 bases:
>100_bases CCATCCAATTTATTGCCTATAGGTCCTCACATGTCAAAACACGCACTCAAGCTGATACCTTCCTCAACGGAGCACGCGGA TGTACCCAATGATTGCAAGA
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: BadM/Rrf2 Family Transcriptional Regulator; Rrf2 Family Protein; Transcriptional Regulator Badm/Rrf2 Family; Rrf2-Like Transcriptional Regulator Protein; Transcriptional Regulator; Rrf2 Family Transcriptional Regulator
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MILSRTTQYAIQALIYMATQPPGVAVLNRTIAECLRSPPTYLAKILQELCKGNLLYSFRGKQGGFCLRESSDKINLMQIV RITEGPGFTEDCVLGLKVCSDTTACPMHAKWWPIKQEIVKLLQGQTLDTLAAMVVSGKYQLTDFPGAVLGNIELPA
Sequences:
>Translated_156_residues MILSRTTQYAIQALIYMATQPPGVAVLNRTIAECLRSPPTYLAKILQELCKGNLLYSFRGKQGGFCLRESSDKINLMQIV RITEGPGFTEDCVLGLKVCSDTTACPMHAKWWPIKQEIVKLLQGQTLDTLAAMVVSGKYQLTDFPGAVLGNIELPA >Mature_156_residues MILSRTTQYAIQALIYMATQPPGVAVLNRTIAECLRSPPTYLAKILQELCKGNLLYSFRGKQGGFCLRESSDKINLMQIV RITEGPGFTEDCVLGLKVCSDTTACPMHAKWWPIKQEIVKLLQGQTLDTLAAMVVSGKYQLTDFPGAVLGNIELPA
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17149; Mature: 17149
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSRTTQYAIQALIYMATQPPGVAVLNRTIAECLRSPPTYLAKILQELCKGNLLYSFRG CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECC KQGGFCLRESSDKINLMQIVRITEGPGFTEDCVLGLKVCSDTTACPMHAKWWPIKQEIVK CCCCEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH LLQGQTLDTLAAMVVSGKYQLTDFPGAVLGNIELPA HHCCCCHHHHHHHHHCCCEEECCCCCCEECCCCCCC >Mature Secondary Structure MILSRTTQYAIQALIYMATQPPGVAVLNRTIAECLRSPPTYLAKILQELCKGNLLYSFRG CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECC KQGGFCLRESSDKINLMQIVRITEGPGFTEDCVLGLKVCSDTTACPMHAKWWPIKQEIVK CCCCEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH LLQGQTLDTLAAMVVSGKYQLTDFPGAVLGNIELPA HHCCCCHHHHHHHHHCCCEEECCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA