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The map label for this gene is hss [H]

Identifier: 82702824

GI number: 82702824

Start: 1939445

End: 1940905

Strand: Reverse

Name: hss [H]

Synonym: Nmul_A1700

Alternate gene names: 82702824

Gene position: 1940905-1939445 (Counterclockwise)

Preceding gene: 82702826

Following gene: 82702817

Centisome position: 60.95

GC content: 52.7

Gene sequence:

>1461_bases
ATGAGGAGGAGGATTAATTTCGATATGGAAATGAAAGCGCACAAGCAGGCAAACACCAAACACGCGCATCTGCAGGGGAA
TTTGATAATAGTGGGTTTTGGCAGCGTAGGCCAGGCTTTGCTTTCGTTATTGTTTCAGAATATCGAGATTCGTTCCGATC
AGGTGAGGATAATCACAGCTGATGAACATGGCAGTGAAATCGCTAGCAAATTTAGCGTCTCATTCACACCCCATTCGCTG
ACCGAGGAAAATTATCTCGCTGTGCTGGAGCCTTGGCTCGATGAGGGAGATTTCCTGCTTAATCTCGCCGTAGACGTTTC
CAGCCTTGCTCTAATGGAATTGTGCTGGCGGCGAGGCGCATTGTACCTGGACACTTGCATTGAACCCTGGGCCGGTGGAT
ATGTTGACCGATCCGTTTCCCCGTCCTTGCGTTCCAATTATGCGCTGCGTGAGCAAGCACTCGCTTTTGCGCGGGAAAAG
CAGGAAGGCCCCACCGCGCTTCTGTCGCACGGCGCGAATCCGGGTCTTGCCTCGACATTTGCGAAACAGGCATTACTGAA
CATTGCTGCGGACACCGGCATGGCAGTGAAAAAACCCACAAACTCCTGCGAATGGGCACAACTTGCGTATCAGCTCAATA
TAAAAGCAATTCATATTGCAGAGCGTGATACCCAGGCTGCTTCTCAACGCAAACAGCCCAATGAGTTTGTCAACACCTGG
TCGGTGGATGGTTTTGTCGGTGAAGGTCTTCAGCCATCGGAACTGGGATGGGGGACTCATGAACGCCATTGGCCGGTGGA
TGGAGCGCATCATGGATTCGGATGCGATGCCGCCATCTATCTCAACCGCCCCGGCGCTTCTACCCGCGCGCGCAGTTGGA
CACCCCTCGGCGGACCGTATCACGGTTTTCTGATAACCCATAACGAATCCATCTCCATAGCCGACCATCTGACATTGAGA
GAAAAGGGAGAGGTGATTTACCGTCCAACGGTGCATTACGCTTATCTTCCCTGTGACGATGCTGTACTTTCAGTTCACGA
GCTTGCGGGCAGAAATTGGCAGATACAGGCGAAAAAACGCATTCTTCGGGATGAACTGGTGGAGGGGACGGACGAGCTTG
GCGTGCTGCTCATGGGCCACGCAAAATGCGCTTACTGGTATGGATCCCGGTTATCCATAGGGGAAGCACGCCGGCTTGCC
CGATTCAATAGTGCTACCAGCTTGCAGGTCGTAGCTGGCATTCTTGCCGGAATGATATGGGCTCTGCAGAATCCGAGATC
GGGTGTAGTGGAACCTGAAGCAATCGACCACGAGCTTGTCCTGGAGGTAGCCAAGCCCTATCTGGGAGAGCTTGTGGGGA
TCTATTCGGACTGGACTCCGTTGCAGGATCGAGGATGGTTATTTGACGAGGATGTCGACAGGGAGGATCCCTGGCAATTC
AAGAATGTTCGCGTAACATAA

Upstream 100 bases:

>100_bases
ATCGGGGGTATCAATGTGGATGATGTGTGGATCGAAATTGGGAAATTACGGGTGGAAACTGATGGGCGATTGAAAAAGGC
AGTGATGGCAGTGACCAGAA

Downstream 100 bases:

>100_bases
GATCTGCTGCTTTAATCTTTGAAGTTTCGGGACGGGAATTTCTGAGACTCACTGTTCGGTGACAGTCCAGGATGCACTGC
TATTGCTGCTATATGGGGAA

Product: homospermidine synthase

Products: NA

Alternate protein names: HSS [H]

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MRRRINFDMEMKAHKQANTKHAHLQGNLIIVGFGSVGQALLSLLFQNIEIRSDQVRIITADEHGSEIASKFSVSFTPHSL
TEENYLAVLEPWLDEGDFLLNLAVDVSSLALMELCWRRGALYLDTCIEPWAGGYVDRSVSPSLRSNYALREQALAFAREK
QEGPTALLSHGANPGLASTFAKQALLNIAADTGMAVKKPTNSCEWAQLAYQLNIKAIHIAERDTQAASQRKQPNEFVNTW
SVDGFVGEGLQPSELGWGTHERHWPVDGAHHGFGCDAAIYLNRPGASTRARSWTPLGGPYHGFLITHNESISIADHLTLR
EKGEVIYRPTVHYAYLPCDDAVLSVHELAGRNWQIQAKKRILRDELVEGTDELGVLLMGHAKCAYWYGSRLSIGEARRLA
RFNSATSLQVVAGILAGMIWALQNPRSGVVEPEAIDHELVLEVAKPYLGELVGIYSDWTPLQDRGWLFDEDVDREDPWQF
KNVRVT

Sequences:

>Translated_486_residues
MRRRINFDMEMKAHKQANTKHAHLQGNLIIVGFGSVGQALLSLLFQNIEIRSDQVRIITADEHGSEIASKFSVSFTPHSL
TEENYLAVLEPWLDEGDFLLNLAVDVSSLALMELCWRRGALYLDTCIEPWAGGYVDRSVSPSLRSNYALREQALAFAREK
QEGPTALLSHGANPGLASTFAKQALLNIAADTGMAVKKPTNSCEWAQLAYQLNIKAIHIAERDTQAASQRKQPNEFVNTW
SVDGFVGEGLQPSELGWGTHERHWPVDGAHHGFGCDAAIYLNRPGASTRARSWTPLGGPYHGFLITHNESISIADHLTLR
EKGEVIYRPTVHYAYLPCDDAVLSVHELAGRNWQIQAKKRILRDELVEGTDELGVLLMGHAKCAYWYGSRLSIGEARRLA
RFNSATSLQVVAGILAGMIWALQNPRSGVVEPEAIDHELVLEVAKPYLGELVGIYSDWTPLQDRGWLFDEDVDREDPWQF
KNVRVT
>Mature_486_residues
MRRRINFDMEMKAHKQANTKHAHLQGNLIIVGFGSVGQALLSLLFQNIEIRSDQVRIITADEHGSEIASKFSVSFTPHSL
TEENYLAVLEPWLDEGDFLLNLAVDVSSLALMELCWRRGALYLDTCIEPWAGGYVDRSVSPSLRSNYALREQALAFAREK
QEGPTALLSHGANPGLASTFAKQALLNIAADTGMAVKKPTNSCEWAQLAYQLNIKAIHIAERDTQAASQRKQPNEFVNTW
SVDGFVGEGLQPSELGWGTHERHWPVDGAHHGFGCDAAIYLNRPGASTRARSWTPLGGPYHGFLITHNESISIADHLTLR
EKGEVIYRPTVHYAYLPCDDAVLSVHELAGRNWQIQAKKRILRDELVEGTDELGVLLMGHAKCAYWYGSRLSIGEARRLA
RFNSATSLQVVAGILAGMIWALQNPRSGVVEPEAIDHELVLEVAKPYLGELVGIYSDWTPLQDRGWLFDEDVDREDPWQF
KNVRVT

Specific function: Involved in the NAD(+)-dependent synthesis of the polyamine homospermidine from putrescine [H]

COG id: COG5310

COG function: function code Q; Homospermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023181
- InterPro:   IPR016040
- InterPro:   IPR005097 [H]

Pfam domain/function: PF03435 Saccharop_dh [H]

EC number: =2.5.1.44 [H]

Molecular weight: Translated: 54187; Mature: 54187

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRINFDMEMKAHKQANTKHAHLQGNLIIVGFGSVGQALLSLLFQNIEIRSDQVRIITA
CCCCCCCCCCCHHHHCCCCCEEEEECCEEEEECCHHHHHHHHHHHHCCEECCCEEEEEEE
DEHGSEIASKFSVSFTPHSLTEENYLAVLEPWLDEGDFLLNLAVDVSSLALMELCWRRGA
CCCCHHHHHHEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHCCC
LYLDTCIEPWAGGYVDRSVSPSLRSNYALREQALAFAREKQEGPTALLSHGANPGLASTF
EEEEHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHH
AKQALLNIAADTGMAVKKPTNSCEWAQLAYQLNIKAIHIAERDTQAASQRKQPNEFVNTW
HHHHHHHHHHCCCCEEECCCCCCCHHEEEEEEEEEEEEEECCCHHHHHHCCCCHHHHHEE
SVDGFVGEGLQPSELGWGTHERHWPVDGAHHGFGCDAAIYLNRPGASTRARSWTPLGGPY
ECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE
HGFLITHNESISIADHLTLREKGEVIYRPTVHYAYLPCDDAVLSVHELAGRNWQIQAKKR
EEEEEEECCCEEHHHHEEEECCCCEEEECCEEEEEECCCHHHHHHHHHCCCCEEEHHHHH
ILRDELVEGTDELGVLLMGHAKCAYWYGSRLSIGEARRLARFNSATSLQVVAGILAGMIW
HHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ALQNPRSGVVEPEAIDHELVLEVAKPYLGELVGIYSDWTPLQDRGWLFDEDVDREDPWQF
HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
KNVRVT
CCCEEC
>Mature Secondary Structure
MRRRINFDMEMKAHKQANTKHAHLQGNLIIVGFGSVGQALLSLLFQNIEIRSDQVRIITA
CCCCCCCCCCCHHHHCCCCCEEEEECCEEEEECCHHHHHHHHHHHHCCEECCCEEEEEEE
DEHGSEIASKFSVSFTPHSLTEENYLAVLEPWLDEGDFLLNLAVDVSSLALMELCWRRGA
CCCCHHHHHHEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHCCC
LYLDTCIEPWAGGYVDRSVSPSLRSNYALREQALAFAREKQEGPTALLSHGANPGLASTF
EEEEHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHH
AKQALLNIAADTGMAVKKPTNSCEWAQLAYQLNIKAIHIAERDTQAASQRKQPNEFVNTW
HHHHHHHHHHCCCCEEECCCCCCCHHEEEEEEEEEEEEEECCCHHHHHHCCCCHHHHHEE
SVDGFVGEGLQPSELGWGTHERHWPVDGAHHGFGCDAAIYLNRPGASTRARSWTPLGGPY
ECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCE
HGFLITHNESISIADHLTLREKGEVIYRPTVHYAYLPCDDAVLSVHELAGRNWQIQAKKR
EEEEEEECCCEEHHHHEEEECCCCEEEECCEEEEEECCCHHHHHHHHHCCCCEEEHHHHH
ILRDELVEGTDELGVLLMGHAKCAYWYGSRLSIGEARRLARFNSATSLQVVAGILAGMIW
HHHHHHHCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ALQNPRSGVVEPEAIDHELVLEVAKPYLGELVGIYSDWTPLQDRGWLFDEDVDREDPWQF
HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
KNVRVT
CCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8841401 [H]