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The map label for this gene is fccB [H]

Identifier: 82702806

GI number: 82702806

Start: 1923507

End: 1924790

Strand: Reverse

Name: fccB [H]

Synonym: Nmul_A1682

Alternate gene names: 82702806

Gene position: 1924790-1923507 (Counterclockwise)

Preceding gene: 82702807

Following gene: 82702805

Centisome position: 60.45

GC content: 58.8

Gene sequence:

>1284_bases
ATGAACGAGCGTATTCGGAACAACGCAGTATCCACACCCCCGATCGATGCCGCTTGTAACTGGAGCGGAGACTTTGATGT
CGTTGTGATTGGAGGAGGCGCGGCAGGCATAGGGGTTACAGCGAGCCTGCTTCGACGTCAGCCTTCCCTGCGCATCGCAA
TCATCGAGCCCGGTGACCGGCACTACTATCAGCCAGCCTGGACGCTCGTGGGGGGAGGCGCGTACGACATCGCAAAAACG
GTGCAGCCGATGGACAGCGTCATTCCGCCCGGAGCTACCTGGATCCAGGCTACAGCGAATGGCTTTGATCCGGATTCCAA
TCTTGTTCATCTGGTGGGCGGCCGTTCTGTCGGCTACAGGCAACTGGTGGTGTGCCCGGGCCTGCGCCTGGCGTGGGAGC
AGATCGAGGGGTTGGAGGATACGCTGGGGAAAAACGGCGTCACATCCAATTACAGATTCGGTCTGGCGCCGTATACCTGG
TCTCTGGTAAAGGAATTCAAGGGCGGCAGGGCTATTTTTACCCAGCCGCCGATGCCGATCAAGTGCGCGGGCGCCCCGCA
AAAGGCAATGTACCTGTCATGCGATCACTGGTTGCGGGAAGGAGTGCTCGACAATATCAGCGTCGAGTTCAACAGCGCCG
CGCCTGTGCTGTTCGGTGTGGCGGCTTTCGTTCCGCCACTAATGGAGTACGTGAAGCGCTATAACGCAAATCTCGTATTC
AACTCCAACCTCGTCAAGGTGGATGGGCCAAACAGGACTGCCTGGTTTGATATCCGTCAGCCCGATGGAAGCATCGAGCG
GGTGGCAAAGCCCTTCGAGATGCTGCACATCTCGCCGCCCCAGATGGCCCCTGATTTCGTGCGCAAAAGCTCCCTGGCAG
ATCCCACGGGATGGTGTGAGGTTGATCACAAGACGCTGCGGCACTCTCGCTATGCAAATATCTTCTCTCTTGGGGATGTG
TGCTCCGCCCCTAACGCGAAGACCGCTGCTGCTGTCAGAAAGCAGATCGTTGTAGTTGCGGAAAACCTGCTGGCAGCGAG
GGAAGGAAGGGAGTTGGCCACACTGTACGATGGGTACGGCTCCTGTCCGCTTACCGTGGAAAAGGGGAAGGTCATTCTTG
CCGAGTTCGGGTTCGGCGGCAAGCTGCTCCCGACTTTTCGGCTCGATCCGACAGTTCCGCGCTACCTGGCCTGGCTGCTC
AAGGCGAAGTTCCTGCCGTGGTTTTACTGGCATGGTTTCCTGAAAGGGCGCGAGTGGCTCGCCCGTCCGGGCAGTACCAT
CTGA

Upstream 100 bases:

>100_bases
AGAGCTGATTATTCACGCTGTACCCGATTGCAAACAATATGCATGGCCTACCCTGGGCCGCGGGTGGAGCAGGAACAATT
GAAAGAAGGAGGATTAAGTG

Downstream 100 bases:

>100_bases
GCCGTGCCAGTCTCAATAGTTGTCGCCCTTTTTGGCGCCCTGGTTGGCCTAATACTCGGGCTAACCGGGGCGGGCGGCGC
TATCATTGCCGTTCCACTGC

Product: pyridine nucleotide-disulfide oxidoreductase class-II

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNERIRNNAVSTPPIDAACNWSGDFDVVVIGGGAAGIGVTASLLRRQPSLRIAIIEPGDRHYYQPAWTLVGGGAYDIAKT
VQPMDSVIPPGATWIQATANGFDPDSNLVHLVGGRSVGYRQLVVCPGLRLAWEQIEGLEDTLGKNGVTSNYRFGLAPYTW
SLVKEFKGGRAIFTQPPMPIKCAGAPQKAMYLSCDHWLREGVLDNISVEFNSAAPVLFGVAAFVPPLMEYVKRYNANLVF
NSNLVKVDGPNRTAWFDIRQPDGSIERVAKPFEMLHISPPQMAPDFVRKSSLADPTGWCEVDHKTLRHSRYANIFSLGDV
CSAPNAKTAAAVRKQIVVVAENLLAAREGRELATLYDGYGSCPLTVEKGKVILAEFGFGGKLLPTFRLDPTVPRYLAWLL
KAKFLPWFYWHGFLKGREWLARPGSTI

Sequences:

>Translated_427_residues
MNERIRNNAVSTPPIDAACNWSGDFDVVVIGGGAAGIGVTASLLRRQPSLRIAIIEPGDRHYYQPAWTLVGGGAYDIAKT
VQPMDSVIPPGATWIQATANGFDPDSNLVHLVGGRSVGYRQLVVCPGLRLAWEQIEGLEDTLGKNGVTSNYRFGLAPYTW
SLVKEFKGGRAIFTQPPMPIKCAGAPQKAMYLSCDHWLREGVLDNISVEFNSAAPVLFGVAAFVPPLMEYVKRYNANLVF
NSNLVKVDGPNRTAWFDIRQPDGSIERVAKPFEMLHISPPQMAPDFVRKSSLADPTGWCEVDHKTLRHSRYANIFSLGDV
CSAPNAKTAAAVRKQIVVVAENLLAAREGRELATLYDGYGSCPLTVEKGKVILAEFGFGGKLLPTFRLDPTVPRYLAWLL
KAKFLPWFYWHGFLKGREWLARPGSTI
>Mature_427_residues
MNERIRNNAVSTPPIDAACNWSGDFDVVVIGGGAAGIGVTASLLRRQPSLRIAIIEPGDRHYYQPAWTLVGGGAYDIAKT
VQPMDSVIPPGATWIQATANGFDPDSNLVHLVGGRSVGYRQLVVCPGLRLAWEQIEGLEDTLGKNGVTSNYRFGLAPYTW
SLVKEFKGGRAIFTQPPMPIKCAGAPQKAMYLSCDHWLREGVLDNISVEFNSAAPVLFGVAAFVPPLMEYVKRYNANLVF
NSNLVKVDGPNRTAWFDIRQPDGSIERVAKPFEMLHISPPQMAPDFVRKSSLADPTGWCEVDHKTLRHSRYANIFSLGDV
CSAPNAKTAAAVRKQIVVVAENLLAAREGRELATLYDGYGSCPLTVEKGKVILAEFGFGGKLLPTFRLDPTVPRYLAWLL
KAKFLPWFYWHGFLKGREWLARPGSTI

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=392, Percent_Identity=37.5, Blast_Score=298, Evalue=5e-81,
Organism=Caenorhabditis elegans, GI17539680, Length=430, Percent_Identity=33.953488372093, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI115534373, Length=337, Percent_Identity=39.1691394658754, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24657386, Length=383, Percent_Identity=38.1201044386423, Blast_Score=278, Evalue=6e-75,
Organism=Drosophila melanogaster, GI24657391, Length=383, Percent_Identity=38.1201044386423, Blast_Score=278, Evalue=6e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 46933; Mature: 46933

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERIRNNAVSTPPIDAACNWSGDFDVVVIGGGAAGIGVTASLLRRQPSLRIAIIEPGDR
CCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCC
HYYQPAWTLVGGGAYDIAKTVQPMDSVIPPGATWIQATANGFDPDSNLVHLVGGRSVGYR
CEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCE
QLVVCPGLRLAWEQIEGLEDTLGKNGVTSNYRFGLAPYTWSLVKEFKGGRAIFTQPPMPI
EEEECCCCHHHHHHHCCHHHHHCCCCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCE
KCAGAPQKAMYLSCDHWLREGVLDNISVEFNSAAPVLFGVAAFVPPLMEYVKRYNANLVF
EECCCCCCEEEEEHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
NSNLVKVDGPNRTAWFDIRQPDGSIERVAKPFEMLHISPPQMAPDFVRKSSLADPTGWCE
CCCEEEECCCCCEEEEEEECCCCHHHHHHCCHHHEECCCCCCCHHHHHHHCCCCCCCCEE
VDHKTLRHSRYANIFSLGDVCSAPNAKTAAAVRKQIVVVAENLLAAREGRELATLYDGYG
CCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
SCPLTVEKGKVILAEFGFGGKLLPTFRLDPTVPRYLAWLLKAKFLPWFYWHGFLKGREWL
CCCEEEECCCEEEEEECCCCEECEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHH
ARPGSTI
CCCCCCC
>Mature Secondary Structure
MNERIRNNAVSTPPIDAACNWSGDFDVVVIGGGAAGIGVTASLLRRQPSLRIAIIEPGDR
CCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCC
HYYQPAWTLVGGGAYDIAKTVQPMDSVIPPGATWIQATANGFDPDSNLVHLVGGRSVGYR
CEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCE
QLVVCPGLRLAWEQIEGLEDTLGKNGVTSNYRFGLAPYTWSLVKEFKGGRAIFTQPPMPI
EEEECCCCHHHHHHHCCHHHHHCCCCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCE
KCAGAPQKAMYLSCDHWLREGVLDNISVEFNSAAPVLFGVAAFVPPLMEYVKRYNANLVF
EECCCCCCEEEEEHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
NSNLVKVDGPNRTAWFDIRQPDGSIERVAKPFEMLHISPPQMAPDFVRKSSLADPTGWCE
CCCEEEECCCCCEEEEEEECCCCHHHHHHCCHHHEECCCCCCCHHHHHHHCCCCCCCCEE
VDHKTLRHSRYANIFSLGDVCSAPNAKTAAAVRKQIVVVAENLLAAREGRELATLYDGYG
CCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
SCPLTVEKGKVILAEFGFGGKLLPTFRLDPTVPRYLAWLLKAKFLPWFYWHGFLKGREWL
CCCEEEECCCEEEEEECCCCEECEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHCHHHH
ARPGSTI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]