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The map label for this gene is ydaA [C]

Identifier: 82702802

GI number: 82702802

Start: 1919225

End: 1920118

Strand: Reverse

Name: ydaA [C]

Synonym: Nmul_A1678

Alternate gene names: 82702802

Gene position: 1920118-1919225 (Counterclockwise)

Preceding gene: 82702803

Following gene: 82702785

Centisome position: 60.3

GC content: 51.68

Gene sequence:

>894_bases
ATGTTGCCTATAAAGCGAATAGTAGTCGGTACCGACATGTCCCCGCTTGCGAGTTGGGCGGCGGCACGGGCGGCGTTGCT
GGCGCATGAATTAGGTAGCGAATCTGTGGACTTGATACATGTCATAGATAATCTTGCCATTGAAACGCTACGTCATCTAA
CGAAGACACCGCTTGAAACTGAGCAGCGATTGATGGAGCTGTCGCGTAAGCAATTAACGGAAATCGAACACACACTTTCC
GAAAAATACAGGATCCCGGTGTCGATCACGACACTGAATGTGGGACGCCCTTATACCGAGATCGTTCGTTATGCGGAGTT
CCTGAATGCTGGCCTTGTCGTACTTGGAGCTCATGGCGGTGGGTTGGTGCGAGAGCTATTTGTTGGCTCTACTGTCGACA
AAGTTCTGCGCAAGCTTACCCGGCCCGTGCTGATCGTCAAACGGGAGCCTCGGGCAGCGTACCGGAAAGTGCTGATCCCT
GTGGATTTCTCGGAATTTTCCGGTCAGGCAACGGAGTTTGCCGTGAACATTGCTCCGCATGCACATATTACTGCTCTGCA
CGCGGTCGAGGTGCCCTTCAAAGCCCGGCTGGAGTCTGCCGGTGTAGATAATAAGCTGATTAAAGTTTACGAGAGCGAAG
TTCAGGTACAAAAGAAAAAGGAGATGGAGGAATTTATCTCCGAATTGAGAGGGCCAAAGCCCACCTTGTCCAGTATCATG
GAATTGGGCCCTGTATCTACTGTAATCCGGAAAAATATGGAAGTGCTTGACCCTGATCTGGTTGTCATCGGCAAACAGGG
ACAGTCCGAGCAGGAGGAGACGCTGCTCGGCGGTGTAGCAAGGCGCGTGATACAAGAGGCAAGCTGCGATATATTGGTAG
TACCGACGTTCTGA

Upstream 100 bases:

>100_bases
TCTCTATCACTGCCACAATCTGGAGCATGAAGATCTGGGCATGATGCGGAATTTTTATGTAAGCTGACATGCTTAGAAAC
CTTTGAAGGAAAACCCCTTT

Downstream 100 bases:

>100_bases
AATGTATTAGCTTGGATTTGAGCTAACAAACAAGTCAGGCTCGAATTGCCCCGGAGTGCCAGGAACGGCCTTTCACGCCT
AAGAAAACTACAAGAGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Universal Stress Protein; Universal Stress Family Protein; UspA Domain Protein; UspA Protein; Universal Stress Protein Family; Universal Stress Family; Universal Stress Protein UspA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MLPIKRIVVGTDMSPLASWAAARAALLAHELGSESVDLIHVIDNLAIETLRHLTKTPLETEQRLMELSRKQLTEIEHTLS
EKYRIPVSITTLNVGRPYTEIVRYAEFLNAGLVVLGAHGGGLVRELFVGSTVDKVLRKLTRPVLIVKREPRAAYRKVLIP
VDFSEFSGQATEFAVNIAPHAHITALHAVEVPFKARLESAGVDNKLIKVYESEVQVQKKKEMEEFISELRGPKPTLSSIM
ELGPVSTVIRKNMEVLDPDLVVIGKQGQSEQEETLLGGVARRVIQEASCDILVVPTF

Sequences:

>Translated_297_residues
MLPIKRIVVGTDMSPLASWAAARAALLAHELGSESVDLIHVIDNLAIETLRHLTKTPLETEQRLMELSRKQLTEIEHTLS
EKYRIPVSITTLNVGRPYTEIVRYAEFLNAGLVVLGAHGGGLVRELFVGSTVDKVLRKLTRPVLIVKREPRAAYRKVLIP
VDFSEFSGQATEFAVNIAPHAHITALHAVEVPFKARLESAGVDNKLIKVYESEVQVQKKKEMEEFISELRGPKPTLSSIM
ELGPVSTVIRKNMEVLDPDLVVIGKQGQSEQEETLLGGVARRVIQEASCDILVVPTF
>Mature_297_residues
MLPIKRIVVGTDMSPLASWAAARAALLAHELGSESVDLIHVIDNLAIETLRHLTKTPLETEQRLMELSRKQLTEIEHTLS
EKYRIPVSITTLNVGRPYTEIVRYAEFLNAGLVVLGAHGGGLVRELFVGSTVDKVLRKLTRPVLIVKREPRAAYRKVLIP
VDFSEFSGQATEFAVNIAPHAHITALHAVEVPFKARLESAGVDNKLIKVYESEVQVQKKKEMEEFISELRGPKPTLSSIM
ELGPVSTVIRKNMEVLDPDLVVIGKQGQSEQEETLLGGVARRVIQEASCDILVVPTF

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32894; Mature: 32894

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIKRIVVGTDMSPLASWAAARAALLAHELGSESVDLIHVIDNLAIETLRHLTKTPLET
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
EQRLMELSRKQLTEIEHTLSEKYRIPVSITTLNVGRPYTEIVRYAEFLNAGLVVLGAHGG
HHHHHHHHHHHHHHHHHHHHHCEECCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCC
GLVRELFVGSTVDKVLRKLTRPVLIVKREPRAAYRKVLIPVDFSEFSGQATEFAVNIAPH
HHHHHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHEEEEEECHHHHCCCCEEEEEEECCC
AHITALHAVEVPFKARLESAGVDNKLIKVYESEVQVQKKKEMEEFISELRGPKPTLSSIM
CCEEEHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELGPVSTVIRKNMEVLDPDLVVIGKQGQSEQEETLLGGVARRVIQEASCDILVVPTF
HHCHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MLPIKRIVVGTDMSPLASWAAARAALLAHELGSESVDLIHVIDNLAIETLRHLTKTPLET
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
EQRLMELSRKQLTEIEHTLSEKYRIPVSITTLNVGRPYTEIVRYAEFLNAGLVVLGAHGG
HHHHHHHHHHHHHHHHHHHHHCEECCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCC
GLVRELFVGSTVDKVLRKLTRPVLIVKREPRAAYRKVLIPVDFSEFSGQATEFAVNIAPH
HHHHHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHEEEEEECHHHHCCCCEEEEEEECCC
AHITALHAVEVPFKARLESAGVDNKLIKVYESEVQVQKKKEMEEFISELRGPKPTLSSIM
CCEEEHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELGPVSTVIRKNMEVLDPDLVVIGKQGQSEQEETLLGGVARRVIQEASCDILVVPTF
HHCHHHHHHHCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA