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The map label for this gene is yafS [H]

Identifier: 82702747

GI number: 82702747

Start: 1859585

End: 1860364

Strand: Reverse

Name: yafS [H]

Synonym: Nmul_A1620

Alternate gene names: 82702747

Gene position: 1860364-1859585 (Counterclockwise)

Preceding gene: 82702755

Following gene: 82702746

Centisome position: 58.42

GC content: 54.1

Gene sequence:

>780_bases
ATGCAAACCAAAAGTATAGTCGAGTGGTTTGAAACTTGCCTGGGCCAGTATCTGCTGGAACGGGAGCAGAAATATTTCGA
TAAGGCGGTGGCAAACGTGTTCGGTTACAACGCGGTGCAGGTCGGGTTTCCGCAATACGATTTCCTGCGCACGAACCGTA
TGCCACTCAAGTTTTGTGCGGCCCCTGAAAAAGGAGCCGACGTTCTTGCCGCTCCTGACTTTCTGCCGATCGAGACGAAT
AGCACCGACCTCGTGCTTATGCCCCATATGCTCGAATTCAGTTCCAATCCTCATCAGATACTCCGTGAGGTGCAGCGGGT
ATTGATGCCGGAAGGTAATCTTATTGTTTCCGGTTTCAATCCACGCAGCCTCTGGGGCATAAGAGGCTTGTTCGGCTCGC
CGCGGGAGGGGGGTTTTCCGTGGCGGGGCAATTTTATCGCGTTGCCGCGGCTCAAGGACTGGCTGACATTATTGGATTTT
GAAATCACGGAAGACCGCCAATGCTGCTACGCACCCCCATTCAGTCAGGAGAAATGGCTGACGCGTTTTCATTTCATGGA
AGAGGCAGGAGAGCGCTTGGGGCGCTTCTCCGGGGGTGTCTATTTCCTCACCGCAGTCAAGCGTGTTCATGGCATGCGCG
TTATCAAGCCTGAATGGAAAGAAGTGCGGGCGAGGAAAAGAGCAATGTCGCCGATTGCACGCAAGATCAAAGGCACAGCC
GCCACGAATGAGCCGCCCAAGGCTGCACGCATTGGAACTTTACCGCAAGGCGAGAAGTGA

Upstream 100 bases:

>100_bases
AACAGGTCAGGCAGATGGATATTTCTGCTGATTCATGAGCTGAGCGATTTTACATGATCGAGTCATAGCACTCCTGGTTG
AACGCCAGTTGACGTTAAAT

Downstream 100 bases:

>100_bases
AAGCGAAACTTGCCGAGGTAGTCGAAATATTTACCGATGGAGCCTGCAAAGGGAATCCGGGGGTGGGCGGGTGGGGCGCC
TTGCTGCAATACAACGGGCA

Product: generic methyl-transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQTKSIVEWFETCLGQYLLEREQKYFDKAVANVFGYNAVQVGFPQYDFLRTNRMPLKFCAAPEKGADVLAAPDFLPIETN
STDLVLMPHMLEFSSNPHQILREVQRVLMPEGNLIVSGFNPRSLWGIRGLFGSPREGGFPWRGNFIALPRLKDWLTLLDF
EITEDRQCCYAPPFSQEKWLTRFHFMEEAGERLGRFSGGVYFLTAVKRVHGMRVIKPEWKEVRARKRAMSPIARKIKGTA
ATNEPPKAARIGTLPQGEK

Sequences:

>Translated_259_residues
MQTKSIVEWFETCLGQYLLEREQKYFDKAVANVFGYNAVQVGFPQYDFLRTNRMPLKFCAAPEKGADVLAAPDFLPIETN
STDLVLMPHMLEFSSNPHQILREVQRVLMPEGNLIVSGFNPRSLWGIRGLFGSPREGGFPWRGNFIALPRLKDWLTLLDF
EITEDRQCCYAPPFSQEKWLTRFHFMEEAGERLGRFSGGVYFLTAVKRVHGMRVIKPEWKEVRARKRAMSPIARKIKGTA
ATNEPPKAARIGTLPQGEK
>Mature_259_residues
MQTKSIVEWFETCLGQYLLEREQKYFDKAVANVFGYNAVQVGFPQYDFLRTNRMPLKFCAAPEKGADVLAAPDFLPIETN
STDLVLMPHMLEFSSNPHQILREVQRVLMPEGNLIVSGFNPRSLWGIRGLFGSPREGGFPWRGNFIALPRLKDWLTLLDF
EITEDRQCCYAPPFSQEKWLTRFHFMEEAGERLGRFSGGVYFLTAVKRVHGMRVIKPEWKEVRARKRAMSPIARKIKGTA
ATNEPPKAARIGTLPQGEK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=97, Percent_Identity=41.2371134020619, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 29657; Mature: 29657

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKSIVEWFETCLGQYLLEREQKYFDKAVANVFGYNAVQVGFPQYDFLRTNRMPLKFCA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEC
APEKGADVLAAPDFLPIETNSTDLVLMPHMLEFSSNPHQILREVQRVLMPEGNLIVSGFN
CCCCCCCEEECCCEEEECCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCC
PRSLWGIRGLFGSPREGGFPWRGNFIALPRLKDWLTLLDFEITEDRQCCYAPPFSQEKWL
CHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCEECCCCCEECCCCCCHHHHH
TRFHFMEEAGERLGRFSGGVYFLTAVKRVHGMRVIKPEWKEVRARKRAMSPIARKIKGTA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHCCCC
ATNEPPKAARIGTLPQGEK
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTKSIVEWFETCLGQYLLEREQKYFDKAVANVFGYNAVQVGFPQYDFLRTNRMPLKFCA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCEEEEC
APEKGADVLAAPDFLPIETNSTDLVLMPHMLEFSSNPHQILREVQRVLMPEGNLIVSGFN
CCCCCCCEEECCCEEEECCCCCCEEECCHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCC
PRSLWGIRGLFGSPREGGFPWRGNFIALPRLKDWLTLLDFEITEDRQCCYAPPFSQEKWL
CHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCEECCCCCEECCCCCCHHHHH
TRFHFMEEAGERLGRFSGGVYFLTAVKRVHGMRVIKPEWKEVRARKRAMSPIARKIKGTA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHCCCC
ATNEPPKAARIGTLPQGEK
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]