BacMap

Definition	Nitrosospira multiformis ATCC 25196 chromosome, complete genome.
Accession	NC_007614
Length	3,184,243

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The map label for this gene is yxnA [H]

Identifier: 82702618

GI number: 82702618

Start: 1699601

End: 1700491

Strand: Reverse

Name: yxnA [H]

Synonym: Nmul_A1489

Alternate gene names: 82702618

Gene position: 1700491-1699601 (Counterclockwise)

Preceding gene: 82702619

Following gene: 82702617

Centisome position: 53.4

GC content: 52.86

Gene sequence:

>891_bases
ATGCAAACTTCTCTTAAACCTCTCGACCAGCAAGTGATTGTGATTACCGGTGCATCAAGCGGCATAGGCCTTGCTACAGC
AATGCTTGCAGCAGAACGGGGGGCAAAGCTCGTTCTTATTGCTCGTAGTGCTAAAACACTCGAGCATCTGGTTGCAAGGA
TAGCAAACACTGGAGGGGAGGCTATCGATGTTGTCGCGGATGTTGCCGATCGGGAAAAAATGCGTCTCGCGGCGCAAACT
GCGGTTGACCGTTTTGGCCATATCGATACCTGGATCAATAACGCAGGTGTGGCAATTTACGGACGTCTCGATGAAGTCAA
CGAAGCCGACAGCCGGCGTCTTTTCGATACCAACTTCTGGGGGGTGGTCAATGGTTCGCTTGCCGCCTTGCCTTACCTGA
AAAAGCAGGGCGGAGCGCTCATAAATGTAGGCAGCGAAACTTCCGAGGCTATCGTGCCTCTTCTGGGAATGTATTCCGCA
TCCAAGCATGCGGTGAAAGGCTTCACTGATGCATTACGCGTGGAAGTCCAGGAATTCGACAAGGCACCCGTAGTGATTAC
ACTGATTCAGCCTTCCGCCGTGAATACACCTTTTCCGCAGCATGCCAAGAATTATATGGACAAGGAGCCAAAATTGCCGC
CCCCTCTGATCAATCCCGAGCAGGTTGCTGAAGCGATACTGAAAGCAGCTACTGAAGGAGGACGTGACGTAAAGGTCGGT
GCAATGGCGGTCGTCAACACGATGATATCCAAGCTTGCTCCGAGTTTCGGAGACAAGATGTCCGCCAAGCGCGGAAGCGG
CCAGCGGGAAAGGGTCTTCCCGCTACATCCACAAGGCACTTTATATGAACCGGGAGAATCGGGATCGGCGCACGGTCACG
CATCTTCATGA

Upstream 100 bases:

>100_bases
TACCCGCTATGTGCGATTCTGCACAGTCGAAATATGCGACAGCTTCTAGCCTTGATGCATTACCTGATTTTTCCCATGTC
ATTTTTTCAAGGTGAGAATC

Downstream 100 bases:

>100_bases
GTCTCTGCCAAGTAGAGCCAGGTTATGCATTCATCTTTTATATCCTTTATAACTTGTTTGATTTTGGAGTATGTGTGGCT
CCGTACATAAAACAACCAGT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MQTSLKPLDQQVIVITGASSGIGLATAMLAAERGAKLVLIARSAKTLEHLVARIANTGGEAIDVVADVADREKMRLAAQT
AVDRFGHIDTWINNAGVAIYGRLDEVNEADSRRLFDTNFWGVVNGSLAALPYLKKQGGALINVGSETSEAIVPLLGMYSA
SKHAVKGFTDALRVEVQEFDKAPVVITLIQPSAVNTPFPQHAKNYMDKEPKLPPPLINPEQVAEAILKAATEGGRDVKVG
AMAVVNTMISKLAPSFGDKMSAKRGSGQRERVFPLHPQGTLYEPGESGSAHGHASS

Sequences:

>Translated_296_residues
MQTSLKPLDQQVIVITGASSGIGLATAMLAAERGAKLVLIARSAKTLEHLVARIANTGGEAIDVVADVADREKMRLAAQT
AVDRFGHIDTWINNAGVAIYGRLDEVNEADSRRLFDTNFWGVVNGSLAALPYLKKQGGALINVGSETSEAIVPLLGMYSA
SKHAVKGFTDALRVEVQEFDKAPVVITLIQPSAVNTPFPQHAKNYMDKEPKLPPPLINPEQVAEAILKAATEGGRDVKVG
AMAVVNTMISKLAPSFGDKMSAKRGSGQRERVFPLHPQGTLYEPGESGSAHGHASS
>Mature_296_residues
MQTSLKPLDQQVIVITGASSGIGLATAMLAAERGAKLVLIARSAKTLEHLVARIANTGGEAIDVVADVADREKMRLAAQT
AVDRFGHIDTWINNAGVAIYGRLDEVNEADSRRLFDTNFWGVVNGSLAALPYLKKQGGALINVGSETSEAIVPLLGMYSA
SKHAVKGFTDALRVEVQEFDKAPVVITLIQPSAVNTPFPQHAKNYMDKEPKLPPPLINPEQVAEAILKAATEGGRDVKVG
AMAVVNTMISKLAPSFGDKMSAKRGSGQRERVFPLHPQGTLYEPGESGSAHGHASS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=278, Percent_Identity=27.6978417266187, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI4503817, Length=238, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI157739938, Length=196, Percent_Identity=31.1224489795918, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI7706318, Length=200, Percent_Identity=29.5, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI142976729, Length=227, Percent_Identity=28.1938325991189, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI109715829, Length=230, Percent_Identity=29.1304347826087, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI7657478, Length=193, Percent_Identity=31.0880829015544, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI31542939, Length=229, Percent_Identity=28.3842794759825, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI19743808, Length=249, Percent_Identity=26.9076305220884, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI32455239, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI5031765, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI40548397, Length=201, Percent_Identity=31.3432835820896, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI214010158, Length=201, Percent_Identity=31.3432835820896, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI214010156, Length=201, Percent_Identity=31.3432835820896, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI22758144, Length=201, Percent_Identity=31.3432835820896, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI210032110, Length=197, Percent_Identity=27.4111675126904, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI224922801, Length=165, Percent_Identity=31.5151515151515, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI40254992, Length=212, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI40254986, Length=134, Percent_Identity=35.0746268656716, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI32483357, Length=211, Percent_Identity=28.436018957346, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI22507405, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI223718074, Length=196, Percent_Identity=31.6326530612245, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI150247226, Length=196, Percent_Identity=29.0816326530612, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=28.9340101522843, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=27.319587628866, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI38348362, Length=180, Percent_Identity=30.5555555555556, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI5031737, Length=194, Percent_Identity=27.319587628866, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87082100, Length=224, Percent_Identity=29.9107142857143, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1786701, Length=229, Percent_Identity=27.9475982532751, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1788459, Length=208, Percent_Identity=28.3653846153846, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787905, Length=134, Percent_Identity=31.3432835820896, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI2367365, Length=188, Percent_Identity=29.2553191489362, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789208, Length=234, Percent_Identity=28.2051282051282, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=192, Percent_Identity=31.7708333333333, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17508895, Length=192, Percent_Identity=31.25, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17570069, Length=197, Percent_Identity=29.9492385786802, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=168, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=201, Percent_Identity=32.3383084577114, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17567345, Length=193, Percent_Identity=28.4974093264249, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=233, Percent_Identity=30.0429184549356, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=200, Percent_Identity=29.5, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17507613, Length=240, Percent_Identity=26.25, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI32563809, Length=246, Percent_Identity=25.609756097561, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=212, Percent_Identity=28.3018867924528, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=214, Percent_Identity=32.2429906542056, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=169, Percent_Identity=30.1775147928994, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=197, Percent_Identity=30.9644670050761, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=198, Percent_Identity=29.2929292929293, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=240, Percent_Identity=26.25, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=206, Percent_Identity=28.6407766990291, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=197, Percent_Identity=31.4720812182741, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=271, Percent_Identity=23.9852398523985, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=225, Percent_Identity=28, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=226, Percent_Identity=27.4336283185841, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=225, Percent_Identity=26.2222222222222, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6323882, Length=219, Percent_Identity=35.6164383561644, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6322226, Length=170, Percent_Identity=30.5882352941176, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=296, Percent_Identity=27.3648648648649, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356301, Length=255, Percent_Identity=32.5490196078431, Blast_Score=104, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24580925, Length=208, Percent_Identity=31.7307692307692, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI23397609, Length=172, Percent_Identity=36.6279069767442, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571526, Length=208, Percent_Identity=28.8461538461538, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644339, Length=201, Percent_Identity=30.8457711442786, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24648944, Length=225, Percent_Identity=30.6666666666667, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21357041, Length=167, Percent_Identity=30.5389221556886, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24641388, Length=242, Percent_Identity=33.4710743801653, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21358495, Length=265, Percent_Identity=25.2830188679245, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007236, Length=227, Percent_Identity=29.5154185022026, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI18859837, Length=224, Percent_Identity=30.3571428571429, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24640492, Length=259, Percent_Identity=27.7992277992278, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24639444, Length=230, Percent_Identity=27.8260869565217, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24651139, Length=187, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21357673, Length=144, Percent_Identity=36.1111111111111, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24665247, Length=188, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281364892, Length=259, Percent_Identity=24.7104247104247, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24665243, Length=187, Percent_Identity=26.2032085561497, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221331216, Length=188, Percent_Identity=27.6595744680851, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24641232, Length=232, Percent_Identity=28.0172413793103, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221331218, Length=187, Percent_Identity=26.2032085561497, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24643142, Length=166, Percent_Identity=31.9277108433735, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007238, Length=207, Percent_Identity=27.536231884058, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355319, Length=202, Percent_Identity=27.7227722772277, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581726, Length=232, Percent_Identity=25.8620689655172, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31427; Mature: 31427

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSLKPLDQQVIVITGASSGIGLATAMLAAERGAKLVLIARSAKTLEHLVARIANTGGE
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCC
AIDVVADVADREKMRLAAQTAVDRFGHIDTWINNAGVAIYGRLDEVNEADSRRLFDTNFW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCHHCCCCCCCEEECCCCC
GVVNGSLAALPYLKKQGGALINVGSETSEAIVPLLGMYSASKHAVKGFTDALRVEVQEFD
EEECCCHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
KAPVVITLIQPSAVNTPFPQHAKNYMDKEPKLPPPLINPEQVAEAILKAATEGGRDVKVG
CCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHH
AMAVVNTMISKLAPSFGDKMSAKRGSGQRERVFPLHPQGTLYEPGESGSAHGHASS
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MQTSLKPLDQQVIVITGASSGIGLATAMLAAERGAKLVLIARSAKTLEHLVARIANTGGE
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCC
AIDVVADVADREKMRLAAQTAVDRFGHIDTWINNAGVAIYGRLDEVNEADSRRLFDTNFW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCHHCCCCCCCEEECCCCC
GVVNGSLAALPYLKKQGGALINVGSETSEAIVPLLGMYSASKHAVKGFTDALRVEVQEFD
EEECCCHHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
KAPVVITLIQPSAVNTPFPQHAKNYMDKEPKLPPPLINPEQVAEAILKAATEGGRDVKVG
CCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHH
AMAVVNTMISKLAPSFGDKMSAKRGSGQRERVFPLHPQGTLYEPGESGSAHGHASS
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]