Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is frvA
Identifier: 82546248
GI number: 82546248
Start: 3945417
End: 3945863
Strand: Reverse
Name: frvA
Synonym: SBO_3916
Alternate gene names: 82546248
Gene position: 3945863-3945417 (Counterclockwise)
Preceding gene: 82546249
Following gene: 82546247
Centisome position: 87.3
GC content: 49.89
Gene sequence:
>447_bases ATGGCAGCTCTTACTGCAAGCTGTATTGACCTGAATATTCAGGGCAATGGCGCTTATTCCGTTCTGAAGCAGTTGGCGAC AATAGCGTTACAAAACGGTTTTATCACCGACTCACACCAGTTCCTGCAAACCCTGCTGCTGCGCGAAAAAATGCACTCTA CTGGATTTGGTTCCGGTGTCGCCGTGCCGCACGGTAAAAGCGCCTGCGTTAAACAACCGTTCGTATTATTCGCCCGCAAA GCGCAGGCTATTGACTGGAAAGCCAGCGATGGCGAAGACGTCAATTGCTGGATCTGCCTCGGCGTGCCGCAAAGCGGCGA AGAGGATCAGGTCAAAATCATCGGCACACTGTGTCGCAAAATTATTCACAAGGAATTTATTCATCAACTGCAACAGGGCG ATACCGACCAAGTGCTTGCCTTGTTAAATCAAACCCTCAGCTCATAA
Upstream 100 bases:
>100_bases CTCTGTCTCAAATTGTCATTGTTTACCGACATATCGCCTCTCATCACTTAATCGCTCCACCATTACAATTGATTAAAATA TATTTTATGGAGTCCGATTA
Downstream 100 bases:
>100_bases GGAAGTGGCGATGGAGTCATCCTTACGTATTGTCGCGATCACCAACTGCCCCGCCGGGATCGCTCACACCTACATGGTGG CGGAAGCCCTGGAACAGAAA
Product: fructose-like phosphotransferase system subunit EIIA
Products: protein histidine; sugar phosphate
Alternate protein names: PTS system fructose-like EIIA component
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARK AQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS
Sequences:
>Translated_148_residues MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARK AQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS >Mature_147_residues AALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKA QAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane
COG id: COG1762
COG function: function code GT; Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain
Homologues:
Organism=Escherichia coli, GI2367327, Length=148, Percent_Identity=100, Blast_Score=304, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PTFA_ECOLI (P32155)
Other databases:
- EMBL: X60472 - EMBL: L19201 - EMBL: U00096 - EMBL: AP009048 - PIR: D48649 - RefSeq: AP_003908.1 - RefSeq: NP_418336.1 - ProteinModelPortal: P32155 - SMR: P32155 - IntAct: P32155 - STRING: P32155 - EnsemblBacteria: EBESCT00000001529 - EnsemblBacteria: EBESCT00000014696 - GeneID: 948391 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW3871 - KEGG: eco:b3900 - EchoBASE: EB1810 - EcoGene: EG11864 - eggNOG: COG1762 - GeneTree: EBGT00050000009030 - HOGENOM: HBG697201 - OMA: HAKSKYV - ProtClustDB: PRK09913 - BioCyc: EcoCyc:FRVA-MONOMER - Genevestigator: P32155 - GO: GO:0005737 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR004715 - Gene3D: G3DSA:3.40.930.10 - TIGRFAMs: TIGR00848
Pfam domain/function: PF00359 PTS_EIIA_2; SSF55804 PTrfase/Anion_transptr
EC number: 2.7.1.69
Molecular weight: Translated: 16094; Mature: 15962
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS51094 PTS_EIIA_TYPE_2; PS00372 PTS_EIIA_TYPE_2_HIS
Important sites: ACT_SITE 64-64
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGV CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC AVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRK CCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH IIHKEFIHQLQQGDTDQVLALLNQTLSS HHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure AALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGV CCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC AVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRK CCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH IIHKEFIHQLQQGDTDQVLALLNQTLSS HHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8396120; 8346018; 9278503; 8019415