The gene/protein map for NC_006055 is currently unavailable.
Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

Click here to switch to the map view.

The map label for this gene is ssb [C]

Identifier: 82546092

GI number: 82546092

Start: 3756037

End: 3756471

Strand: Reverse

Name: ssb [C]

Synonym: SBO_3739

Alternate gene names: 82546092

Gene position: 3756471-3756037 (Counterclockwise)

Preceding gene: 82546096

Following gene: 82546091

Centisome position: 83.11

GC content: 60.23

Gene sequence:

>435_bases
ATGACAGCACAAATTTCAGCATACGGGCGGCTGGTGGCAGATCCCCAGACCCGCACCACAACGAACGGTAACAACATGGC
TATGGCGCGGCTGGCGGTGTCTCTCCCCTGTAATGCGGCAGAGGCGGGAGAGTCAACCTTCTGGCTGGGCGTTATTGCTT
TTGGGAAGCAGGCCGATGCGCTGGCAAAGCACCAGAAAGGCGACCTTGTGAGCGTGGCAGGCAATATGCAACTCAACCAG
TGGACAGGGCAGGACGGCGGTACACAGCAGGGGTATCAGGTAGTAGCCGACAGTGTGATCAGCGCCAGAACGGTACGCCC
CGGCGGGAAGGCAGGACAGCGGGGACAGGCAACGGACGCGCTGAGACGTGCGCAGCAGCCATCCCGTGATGAATACGACC
AACGCCCACCATTCGACGATGAAACGCCATTCTGA

Upstream 100 bases:

>100_bases
ACAGAGACAACACTATTTTTGCTTACTATGAAAAAAAATCGGCAGGTGTCCCACATTAAGAAATCGTCATTAGCAAAACT
AATAATCCAGTGAGGGGAAA

Downstream 100 bases:

>100_bases
GAGGGAAGATATGAGTACGCAACCCATCATTATTGAGTTCGGCAGCTATCGCTGGCCCAGACATCTTGCAATACATGAAG
CAGATCATGCGATAGCCGCA

Product: single stranded DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGESTFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQ
WTGQDGGTQQGYQVVADSVISARTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF

Sequences:

>Translated_144_residues
MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGESTFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQ
WTGQDGGTQQGYQVVADSVISARTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF
>Mature_143_residues
TAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGESTFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQW
TGQDGGTQQGYQVVADSVISARTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF

Specific function: This Protein Is Essential For Replication Of The Chromosomes And Its Single-Stranded DNA Phages. It Is Also Involved In DNA Recombination And Repair. [C]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15398; Mature: 15267

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGESTFWLGVIAFGKQADA
CCCCCCCCCEEEECCCCCEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCHHH
LAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISARTVRPGGKAGQRGQATDA
HHHHCCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LRRAQQPSRDEYDQRPPFDDETPF
HHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGESTFWLGVIAFGKQADA
CCCCCCCCEEEECCCCCEECCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCHHH
LAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISARTVRPGGKAGQRGQATDA
HHHHCCCCEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LRRAQQPSRDEYDQRPPFDDETPF
HHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA