Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is rfaG [H]
Identifier: 82545994
GI number: 82545994
Start: 3651546
End: 3652670
Strand: Reverse
Name: rfaG [H]
Synonym: SBO_3633
Alternate gene names: 82545994
Gene position: 3652670-3651546 (Counterclockwise)
Preceding gene: 82545995
Following gene: 82545993
Centisome position: 80.81
GC content: 48.09
Gene sequence:
>1125_bases ATGATCGTTGCTTTTTGTTTATATAAATATTTTCCCTTTGGCGGTTTGCAGCGCGATTTTATGCGTATTGCTCAGACAGT CGCCGCCCGAGGTCATCATGTTCGGGTTTATACCCAGTCGTGGGAAGGCGAATACCCTGATGTATTTGAACTGATCAAAG TGCCGGTTAAATCGCATACCAATCACGGGCGCAATGCGGAGTATTTTGCCTGGGTGCAAAAACATTTACGCGAACATCCC GTCGATAAAGTCGTTGGATTCAACAAAATGCCGGGGCTGGACGTTTATTATGCCGCTGATGTTTGTTATGCCGAGAAAGT CGCGCAGGAAAAAGGCTTTTTCTATCACCTGACGTCACGTTATCGCCATTATGCCGCCTTTGAGCGGGCAACCTTCGAAC AGGGCAAGCCGACACAGCTGCTGATGCTGACAGATAAGCAAATCGCCGATTTCCAGAAACATTATCAGACTGAAGCGGAG CGTTTTCATATTCTGCCACCGGGGATTTATCCTGATCGTAAATATAGCCAGCAGCCAGCTAATAGCCGTGAAATCTTCCG TAAGAAGAATGGAATAACCGAACAACAATATTTATTGTTGCAGGTCGGTTCAGACTTCACGCGTAAAGGTGTCGATCGTT CCATTGAAGCACTTGCTTCGTTACCGGATTCGCTGCGCCACAACACATTGCTATATGTTGTTGGACAGGATAAACCGCGA AAATTTGAGGCGCTGGCAGAAAAACGCGGCGTGCGCAGTAATGTTCACTTCTTCTCGGGGCGCAACGATGTCTCGGAATT AATGGCGGCGGCGGATTTATTACTGCATCCTGCCTACCAGGAAGCAGCGGGAATTGTGCTACTGGAAGCGATTACTGCAG GATTACCGGTACTAACAACAGCCGTTTGTGGCTATGCGCATTATATTGTCGACGCCAATTGCGGCGAGGCTATTGCTGAG CCATTCCGCCAGGAAACATTGAATGAGATTTTACGCAAAGCGTTAACGCAATCTTCATTGCGCCAGGCCTGGGCGGAAAA TGCGCGACATTATGCTGATACACAAGATTTATACAGTCTGCCAGAGAAAGCGGCGGATATCATAACGGGTGGTCTGGATG GTTGA
Upstream 100 bases:
>100_bases AGCGTGACCGAAATGAGATGTATCTTTCGGTTATTCCGGCGGCAGATGTCATTGCTGCTGTCGATAAATTACTGCCCTCC TCCACGACAGGTACGTCGTT
Downstream 100 bases:
>100_bases ACTTAAAGAGCCGTTTGCCACGTTATGGCGCGGTAAAGATCCTTTTGAGGAAGTTAAAACCTTGCAGGGTGAGGTTTTTC GTGAACTGGAAACTCGCCGC
Product: glucosyltransferase I
Products: NA
Alternate protein names: Glucosyltransferase I [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGEYPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHP VDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAE PFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG
Sequences:
>Translated_374_residues MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGEYPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHP VDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAE PFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG >Mature_374_residues MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGEYPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHP VDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAE PFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG
Specific function: Involved in the addition of the first glucose residue to the lipopolysaccharide core [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790061, Length=374, Percent_Identity=89.8395721925134, Blast_Score=706, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.4.1.-
Molecular weight: Translated: 42570; Mature: 42570
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGEYPDVFELIKVPVKSHT CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC NHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYHLTSR CCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCEEEHHHH YRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAERFHILPPGIYPDRKYSQQPA HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC NSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR CHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCH KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT HHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH AVCGYAHYIVDANCGEAIAEPFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSL HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH PEKAADIITGGLDG HHHHHHHHCCCCCC >Mature Secondary Structure MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGEYPDVFELIKVPVKSHT CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC NHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVCYAEKVAQEKGFFYHLTSR CCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCEEEHHHH YRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAERFHILPPGIYPDRKYSQQPA HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCC NSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEALASLPDSLRHNTLLYVVGQDKPR CHHHHHHHHCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCHHHHCCCEEEEEEECCCCH KFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTT HHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHH AVCGYAHYIVDANCGEAIAEPFRQETLNEILRKALTQSSLRQAWAENARHYADTQDLYSL HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH PEKAADIITGGLDG HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732225; 8041620; 9278503; 1447141; 7988890 [H]