Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is bax

Identifier: 82545941

GI number: 82545941

Start: 3585366

End: 3586190

Strand: Reverse

Name: bax

Synonym: SBO_3578

Alternate gene names: 82545941

Gene position: 3586190-3585366 (Counterclockwise)

Preceding gene: 82545944

Following gene: 82545936

Centisome position: 79.34

GC content: 47.52

Gene sequence:

>825_bases
ATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGC
GAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGTAATAAACAGGTAAGCAGTAAACAAGAGT
ATTCTCGCAATAGTGCAAAGAGTAGTTCACTTCCTGATTTGCGAAAATACCCTTCCGGAACACCAAGGAAAAAGGCGTTT
CTCCGGACCGTAATGCCTTACATTACCAGCCAAAATGCAGCCATTACTGCAGAACGTAACTGGCTGATTTCAAAACAGTA
TCAGGGCCAATGGTCACCTGCTGAGCGTGCGCGTCTGAAAGACATCGCCAAACGCTACAAGGTGAAGTGGTCTGGTAATA
CGCGAAAAATCCCGTGGAATACCTTGCTTGAACGCGTAGACATTATCCCTACCAGTATGGTGGCGACGATGGCTGCAGCA
GAAAGCGGTTGGGGAACGTCGAAGCTGGCGCGCAACAATAACAATCTGTTCGGCATGAAATGCATGAAAGGACGTTGTAC
CAATGCGCCGGGTAAAGTGAAAGGGTACTCACAGTTTAGTTCTGTCAAAGAATCGGTGAGCGCCTATGTCACTAACCTGA
ATACGCACCCGGCTTACTCTTCGTTCCGTAAATCGCGTGCGCAGCTGCGTAAAGCGGATCAGGAAGTGACTGCCACAGCG
ATGATTCACAAGCTGAAGGGCTACTCGACCAAAGGGAAGAGTTATAATAACTACCTGTTCGCAATGTACCAGGATAACCA
ACGGTTAATCGCGGCGCATATGTAA

Upstream 100 bases:

>100_bases
GGTGCTCTTGACAGCTATTTTTGATATGATTTGAGATTCAACTCTCAAATTTGTGAAAAATATAAGGTGTTGGAATGATT
AAATCCGACCAGGAGACCTG

Downstream 100 bases:

>100_bases
TTGCATTTCCTTGAGCCTTATCTGATTTGTCGGTCGGATAAGGCTTTTGCTCGCATCAGGTGGCTGTGCTGAGTTCCCTG
ATGTGACGCCGACAATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF
LRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA
MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM

Sequences:

>Translated_274_residues
MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF
LRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA
MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM
>Mature_274_residues
MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAF
LRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA
MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM

Specific function: Unknown

COG id: COG2992

COG function: function code R; Uncharacterized FlgJ-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994948, Length=274, Percent_Identity=100, Blast_Score=569, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BAX_ECOLI (P27297)

Other databases:

- EMBL:   U00039
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   X58994
- PIR:   S47791
- RefSeq:   AP_004222.1
- RefSeq:   YP_026230.1
- ProteinModelPortal:   P27297
- SMR:   P27297
- STRING:   P27297
- EnsemblBacteria:   EBESCT00000003380
- EnsemblBacteria:   EBESCT00000014997
- GeneID:   948089
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5653
- KEGG:   eco:b3570
- EchoBASE:   EB1335
- EcoGene:   EG11360
- eggNOG:   COG2992
- GeneTree:   EBGT00050000010219
- HOGENOM:   HBG391621
- OMA:   QAANETG
- ProtClustDB:   PRK10356
- BioCyc:   EcoCyc:EG11360-MONOMER
- Genevestigator:   P27297
- InterPro:   IPR002901

Pfam domain/function: PF01832 Glucosaminidase

EC number: NA

Molecular weight: Translated: 30868; Mature: 30868

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
SSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLK
CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHHHHHH
DIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMK
HHHHHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEE
CMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM
HHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC
>Mature Secondary Structure
MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
SSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLK
CCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCCHHHHHHHH
DIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMK
HHHHHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEE
CMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATA
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM
HHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 1544897