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The map label for this gene is yiaF [H]

Identifier: 82545919

GI number: 82545919

Start: 3565208

End: 3566038

Strand: Reverse

Name: yiaF [H]

Synonym: SBO_3556

Alternate gene names: 82545919

Gene position: 3566038-3565208 (Counterclockwise)

Preceding gene: 82545922

Following gene: 82545916

Centisome position: 78.9

GC content: 49.46

Gene sequence:

>831_bases
ATGATTTTACCAGGAAGATTACGTAGAAAGGGTATCCTGCAAGCCTGTCCTGGACTATCCTTGTCACGTCAGACACGCGT
GTGTCGTTGTGCGCTTTTTTTGGGTGAAAGGAGTAAGAAAATGGCGACAGGAAAGTCCTGCTCTCGCTGGTTTGCGCCTC
TTGCGGCGTTATTAATGGTAGTTAGCCTGAGTGGGTGTTTTGATAAAGAAGGCGATCAGCGTAAAGCGTTTATCGACTTC
CTGCAGAATACAGTGATGCGTAGCGGTGAACGTCTACCAACCCTGACTGCCGATCAGAAAAAACAGTTTGGTCCTTTTGT
CTCTGATTACGCGATTCTGTATGGTTATTCTCAGCAGGTGAATCAGGCGATGGATTCCGGTCTGCGCCCGGTCGTAGACA
GCGTTAACGCAATTCGCGTACCGCAGGATTACGTTACGCAAAGCGGTCCGCTGCGTGAAATGAACGGTTCGCTGGGTGTG
CTGGCGCAACAACTGCAAAATGCGAAGTTGCAGGCCGATGCTGCGCACTCTGCGCTAAAACAGACCGATGATTTGAAACC
GGTCTTTGATCAGGCATTCACCAAAGTGGTAACGACGCCAGCTGATGCATTGCAACCGTTGATTCCGGTTGCACAAACTT
TCACGCAACAACTGGTGATGGTTGGAGACTACATTGCTCAACAAGGTACTCAGGTGAGCTTTGTAGCAAATGGTATCCAG
TTCCCGACTTCGCAGCAGGCAAGTGAATATAACAAACTGATTGCGCCGTTACCGGCACAACATCAGGCGTTTAATCAGGC
CTGGACTACAGCAGTTACTGCAACCCAATAA

Upstream 100 bases:

>100_bases
CTAAAGTTCTGCGAAGGCGTAAATCTCGGGCTACAAAAAAGCAACGGCAATATCATTTTTTAACAATGAAACAACAAATT
AACCTTGTTTCATTTTCTCC

Downstream 100 bases:

>100_bases
AGAGTAAAAGCCCGAGCGATTATCGGGCTTTACTTCACGCAGTCGCGGCTTAGTCCGCGACGTGCGGATTCACACAGTTC
TTCTCAACCTTTCCTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MILPGRLRRKGILQACPGLSLSRQTRVCRCALFLGERSKKMATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDF
LQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV
LAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTPADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQ
FPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ

Sequences:

>Translated_276_residues
MILPGRLRRKGILQACPGLSLSRQTRVCRCALFLGERSKKMATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDF
LQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV
LAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTPADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQ
FPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ
>Mature_276_residues
MILPGRLRRKGILQACPGLSLSRQTRVCRCALFLGERSKKMATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDF
LQNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQDYVTQSGPLREMNGSLGV
LAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTPADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQ
FPTSQQASEYNKLIAPLPAQHQAFNQAWTTAVTATQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=236, Percent_Identity=99.1525423728814, Blast_Score=478, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 30201; Mature: 30201

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]