Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is yfeZ [H]
Identifier: 82544892
GI number: 82544892
Start: 2449590
End: 2450045
Strand: Reverse
Name: yfeZ [H]
Synonym: SBO_2458
Alternate gene names: 82544892
Gene position: 2450045-2449590 (Counterclockwise)
Preceding gene: 161984892
Following gene: 82544891
Centisome position: 54.21
GC content: 52.41
Gene sequence:
>456_bases TTGAAGATGAAGAGTACTGAGTTCCATCCTGTCCATTATGATGCGCACGGACGCCTGCGTTTACCCTTGCTCTTCTGGCT TGTGCTATTGCTTCAGGCGCGAACCTGGGTGCTGTTTATCATTGCCGGTGCGTCGCGCGAGCAGGGTACTGCGCTGCTAA ATCTGTTTTATCCCGATCACGATAATTTCTGGCTGGGGTTGATTCCCGGTATTCCGGCGGTGCTGGCGTTTTTGTTGAGC GGTCGGCGGGCTTCGTTTCCTCGCACCTGGCATGTGCTCTATTTTCTGTTGCTGTTGGCGCAGGTGGTTTTACTTTGCTG GCAACCGTGGCTGTGGCTGAACGGTGAATCCGTTAGCGGTATCGGTCTGGCGCTGGTAGTGGCGGATATTGTGGCGTTAA TCTGGCTGCTGACCAATCGACGTTTACGCGCTTGTTTTAATGAAGAAAAAGAATAA
Upstream 100 bases:
>100_bases ATTCAGATCAATGTGCCGGAAGATAACGACATGGTGCTCGGAATGTATGAACGCCTGGGATATGAACACGCCGACATGCT GAGTCTGGGTAAGCGTTTGA
Downstream 100 bases:
>100_bases CGCAGAGGTGCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACATCGAAAATTCAATATATT GCAGGAGAAAGTAGGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKMKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLS GRRASFPRTWHVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE
Sequences:
>Translated_151_residues MKMKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLS GRRASFPRTWHVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE >Mature_151_residues MKMKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLS GRRASFPRTWHVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082103, Length=149, Percent_Identity=96.6442953020134, Blast_Score=247, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021318 [H]
Pfam domain/function: PF11143 DUF2919 [H]
EC number: NA
Molecular weight: Translated: 17390; Mature: 17390
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASREQGTALLNLFYPDH CCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCC DNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVLLCWQPWLWLNGESVSG CCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH IGLALVVADIVALIWLLTNRRLRACFNEEKE HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC >Mature Secondary Structure MKMKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASREQGTALLNLFYPDH CCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEEEECCC DNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVLLCWQPWLWLNGESVSG CCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCH IGLALVVADIVALIWLLTNRRLRACFNEEKE HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]