Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

Click here to switch to the map view.

The map label for this gene is yfeY [H]

Identifier: 82544891

GI number: 82544891

Start: 2448808

End: 2449383

Strand: Reverse

Name: yfeY [H]

Synonym: SBO_2457

Alternate gene names: 82544891

Gene position: 2449383-2448808 (Counterclockwise)

Preceding gene: 82544892

Following gene: 82544890

Centisome position: 54.19

GC content: 50.17

Gene sequence:

>576_bases
ATGAAATCGCTGCGTTTAATGTTATGCGCTATGCCGTTGATGCTGACCGGCTGTTCCACGATGTCGTCAGTTAACTGGTC
GGCTGCTAACCCGTGGAACTGGTTTGGATCGTCCACCAAAGTGAGCGAGCAGGGTGTGGGTGAATTAACGGCGTCCACAC
CACTGCAAGAACAAGCCATTGCTGATGCGCTTGATGGCGATTATCGCCTGCGCAGCGGAATGAAAACCGCGAACGGCAAC
GTGGTGCGCTTTTTTGAAGTGATGAAAGGCGACAACGTGGCGATGGTGATTAACGGCGATCAAGGCACGATCAGTCGCAT
TGACGTGCTGGATAGCGATATTCCTGCTGACACCGGTGTTAAAATCGGTACACCGTTTAGCGACCTTTACAGCAAAGCAT
TTGGCAATTGCCAAAAAGCTGATGGTGATGATAATCGTGCCGTCGAATGTAAAGCCGAAGGCAGTCAACATATTAGCTAC
CAGTTCAGAGGGGAATGGCGTGGTCCTGAAGGGTTAATGCCTTCGGACGATACCCTGAAAAACTGGAAAGTCAGTAAAAT
TATCTGGCGGCGTTAA

Upstream 100 bases:

>100_bases
TAGCGCATCAGGCAATTTTGTGTTTGTCATCAACCTTTAACGGCACTTTTTGGTGAATTTGCACTCCAAGCAACGTTATT
GAATAACCAAAGGAAGTGAC

Downstream 100 bases:

>100_bases
TTTGCGTCTGAACAAACCGCCGCCGCGAAAAAACACGTAAAATAGCGCTCAACAATGCCACGGATTGCGTGGCATTCTTA
TTTTCAGGAGGAACAATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGN
VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR

Sequences:

>Translated_191_residues
MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGN
VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR
>Mature_191_residues
MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGN
VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788772, Length=191, Percent_Identity=99.4764397905759, Blast_Score=394, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010938
- ProDom:   PD105195 [H]

Pfam domain/function: PF06572 DUF1131 [H]

EC number: NA

Molecular weight: Translated: 20967; Mature: 20967

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI
CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV
HHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE
KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFRGEWRGPEGLMPSDDTLK
ECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC
NWKVSKIIWRR
CEEHHHEEECC
>Mature Secondary Structure
MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI
CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV
HHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE
KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFRGEWRGPEGLMPSDDTLK
ECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCC
NWKVSKIIWRR
CEEHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 7764507 [H]