Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is stfR [C]

Identifier: 82544542

GI number: 82544542

Start: 2052934

End: 2054178

Strand: Direct

Name: stfR [C]

Synonym: SBO_2082

Alternate gene names: 82544542

Gene position: 2052934-2054178 (Clockwise)

Preceding gene: 82544537

Following gene: 82544543

Centisome position: 45.42

GC content: 54.46

Gene sequence:

>1245_bases
GTGTACAGCGTTCGCCTGACACAAAGCACACGGCGCCTTTCAGAAATCGGTGTCATCCGCGTTTATGAAGATTCAACGGA
CGGTTCGCTGAATGATTTTCTGGGCGCAACTAATATTGACCTGCGTCCGGAATCCCTGAAGAAATTCGAAGAGCTGGCGC
AACAGGCGCAGCAGAGTGCCGGGAGCGCAGCCGGAAACGCACGGCAGACGGCGCAGGATATGACGGCAGCCGCAACGGCC
CGTGATGATGCACAACGTTTTGCGGAGAAAGCCCGACAGGATGCAACCGTCACAGCTGAGAACAGAAAGGCCACTGCGGA
AGATGTGACAAGCACAGGAGCAAATGCAGCCGCAGCCGGACAGAGCGCACAGGATGCCGCAGGTTATGCCCGCGCAGCAG
AACAGGCCAAAAATGACATTGATGCTGCGCTGACCGGCACTCTGAAAATGGCTAACCATCTGTCAGAAATCGCAGCAGCA
GGCGAAAAGGCACAACAGAAGTCCCGGGATAATCTGGGGCTGAAAAGTGCGGCCACGATGGAAGCACAGAGCGACATTTA
CGACCGGACAAAAGGCCGTCTGGCGATACCCGGCGCATTCGGCTTTGGGTGTGCTTTTCTGCCTGAAGATGTTATCCGTT
TTGACACTAAGAGTGATTTCCTGGCCTGGGTAAGGAATGCGCTGCCAGGTGAATATTCCGTTGCTGGCCCCTACGACATC
ATCATACCCGACACACGGTTTGAAGGGGTGCTCAGCATCCGGTGGACTGATGCACGCCCTGAGACAACAGAACCGCGGTA
CAGAGCCAAATCCCTTACTTTTTACGGCATTAACGGCCCCATTTATCACACCCGCTACTGCTACTGGCCCATATCCAGAC
TGACTGGCTGGGTGAAAATAAATATAACCACAGAAGATATTATTTACAGAATCGTGGCGAGCTCTGTCCGCAACAGATGG
GGAGCCCCTGACATTGGCGGGCTGATTATTGCTGCGTACCAGGGAGAAGCTGACGGTGATAAAGTCATCAGACTTGTCAG
GGGGCAGTCATACAGAGGCTCACGACTGGGACCGGTGGGGATTTCAGTGCCCAGTACTCCCACCGGAACGTATATAGCAT
CCCCACAATTTTTCATTACGGGATGTTCAGAGCATTCATTACCGGGGTCATATTGCGCCCTGTCCGGGGGGCCGGATGCA
CATGTCTCTGGCGCAATGCCCGGGCTTTTTATTCGCACATCGTGA

Upstream 100 bases:

>100_bases
GAACTCTTTAGAGTAACGTTGGTTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCC
GTTAAACTCAGGCTACCTCA

Downstream 100 bases:

>100_bases
GGAATGCACCGTGGAAATTAAAAAAATCATTAATCCCCGTTATACCGAAAGTGGCGCAGTAGACTGTGACGTTTTTTTTG
ACGACAGGGACCAGGCAGTC

Product: phage tail fiber protein

Products: NA

Alternate protein names: Phage Tail Fiber Protein; Phage Tail Fibre Protein; Prophage Tail Fiber Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKKFEELAQQAQQSAGSAAGNARQTAQDMTAAATA
RDDAQRFAEKARQDATVTAENRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAA
GEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDI
IIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRW
GAPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGGPDA
HVSGAMPGLFIRTS

Sequences:

>Translated_414_residues
MYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKKFEELAQQAQQSAGSAAGNARQTAQDMTAAATA
RDDAQRFAEKARQDATVTAENRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAA
GEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDI
IIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRW
GAPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGGPDA
HVSGAMPGLFIRTS
>Mature_414_residues
MYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKKFEELAQQAQQSAGSAAGNARQTAQDMTAAATA
RDDAQRFAEKARQDATVTAENRKATAEDVTSTGANAAAAGQSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAA
GEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDI
IIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVASSVRNRW
GAPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVGISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGGPDA
HVSGAMPGLFIRTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44562; Mature: 44562

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKKFEELAQQAQQSA
CEEEEECHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
GSAAGNARQTAQDMTAAATARDDAQRFAEKARQDATVTAENRKATAEDVTSTGANAAAAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHCC
QSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAAGEKAQQKSRDNLGLKSAATM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
EAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDI
HHHHHHHHCCCCCEEECCCCCCCCHHCCHHHHHCCCCHHHHHHHHHCCCCCEECCCCEEE
IIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKI
EECCCCCCCEEEEEEECCCCCCCCCCHHCCEEEEEECCCCEEECEEEEEEHHHCCEEEEE
NITTEDIIYRIVASSVRNRWGAPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVG
EEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCE
ISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGGPDAHVSGAMPGLFIRTS
EECCCCCCCCEEECCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MYSVRLTQSTRRLSEIGVIRVYEDSTDGSLNDFLGATNIDLRPESLKKFEELAQQAQQSA
CEEEEECHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
GSAAGNARQTAQDMTAAATARDDAQRFAEKARQDATVTAENRKATAEDVTSTGANAAAAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCHHHCC
QSAQDAAGYARAAEQAKNDIDAALTGTLKMANHLSEIAAAGEKAQQKSRDNLGLKSAATM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
EAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDI
HHHHHHHHCCCCCEEECCCCCCCCHHCCHHHHHCCCCHHHHHHHHHCCCCCEECCCCEEE
IIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKI
EECCCCCCCEEEEEEECCCCCCCCCCHHCCEEEEEECCCCEEECEEEEEEHHHCCEEEEE
NITTEDIIYRIVASSVRNRWGAPDIGGLIIAAYQGEADGDKVIRLVRGQSYRGSRLGPVG
EEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCE
ISVPSTPTGTYIASPQFFITGCSEHSLPGSYCALSGGPDAHVSGAMPGLFIRTS
EECCCCCCCCEEECCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA