Definition | Shigella boydii Sb227, complete genome. |
---|---|
Accession | NC_007613 |
Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is 82544537
Identifier: 82544537
GI number: 82544537
Start: 2049811
End: 2050182
Strand: Direct
Name: 82544537
Synonym: SBO_2077
Alternate gene names: NA
Gene position: 2049811-2050182 (Clockwise)
Preceding gene: 82544536
Following gene: 82544542
Centisome position: 45.35
GC content: 51.88
Gene sequence:
>372_bases GTGGTGTGGGTCGGTAAGGATGTGACAGGCATTGAACCCCGTAACGCCAGTGTTATTGAAGTTCCTGATATTACCGCCAA CCGCCGCATTACCGCGCCGGGTTACTGGTTTTACCGCAATGATGAATTTGTCTTTGACTACAGACTCAAAGCGGAAGATG AGCGTGATGCCCTTCTGGCTCAGGTCAGTGCCCGGACAGGGGAATGGGAAGAAGACCTGCTGCTGGGGTTAATCAGCGAC GAAGATAAAGAAAAGCTGAAAGCCTGTCGTATTTACGCGAAATCGCTGCAGGCGATGGATTTCAGCACCATCACAGATAA AGCCACATATAACGCCATCAACTGGCCGGAGCGTCCCGATGCCGCAGCTTAA
Upstream 100 bases:
>100_bases GCACTCACCAATAAATAAGCGTCAATACGGTGCTCCGTTGACGCTTACGAAGAATTTCGCCAGCGACACAATTAAAATAG CTTACACCGGAGACGGGCGC
Downstream 100 bases:
>100_bases AGGTGTGATTAAAACGCCCACGGGAGAACCGCTGGACGGCGCAACCATTACACTAACCTCCATACACAACCGTGCAGGGA TTTTGAAAAGTGTTTTCAGC
Product: tail fiber assembly protein
Products: NA
Alternate protein names: Bacteriophage Tail Protein; Phage Gene
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISD EDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA
Sequences:
>Translated_123_residues MVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISD EDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA >Mature_123_residues MVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVSARTGEWEEDLLLGLISD EDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPDAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14062; Mature: 14062
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLA CEECCCCCCCCCCCCCCEEECCCCCCCCEECCCCEEEEECCCEEEEEEECCCCCHHHHHH QVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPD HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AAA CCC >Mature Secondary Structure MVWVGKDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLA CEECCCCCCCCCCCCCCEEECCCCCCCCEECCCCEEEEECCCEEEEEEECCCCCHHHHHH QVSARTGEWEEDLLLGLISDEDKEKLKACRIYAKSLQAMDFSTITDKATYNAINWPERPD HHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AAA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA