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The map label for this gene is insF1 [C]

Identifier: 82543018

GI number: 82543018

Start: 444956

End: 445687

Strand: Direct

Name: insF1 [C]

Synonym: SBO_0431

Alternate gene names: 82543018

Gene position: 444956-445687 (Clockwise)

Preceding gene: 82543017

Following gene: 82543020

Centisome position: 9.84

GC content: 51.64

Gene sequence:

>732_bases
GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGAGAATGGCATCATCGTTGG
TCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGGCTACGCTGTAAGCAGAAACGCAAGTTCAGAGCGACTACGAACC
CGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTACAGCACCAAATCAGGTCTGGGTGGCG
GACCTGACGTATGTTGCCACACAGGAGGGATGGTTGTACCTCGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGG
CTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACTTG
CCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTCTGGTCTG
AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAG
CCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTC
AGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTCAAAAAAAG
AACAAATGGTAG

Upstream 100 bases:

>100_bases
TCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTCAGACAGAAAACAAAGTGATGAGC
GGCTAAAACTGGAGATTAAG

Downstream 100 bases:

>100_bases
TGTCCGCTATTGCCAGTACACCTCAGACGTTGGTTTCATAGTTACCAGTCTCATAGGAGCGGACAATTTTCCGTTAGGGC
GGTAAATTGTACTTTGATAC

Product: IS600 ORF2

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVA
DLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPLAGLIHHSDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAAQKK
NKW

Sequences:

>Translated_243_residues
MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVA
DLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPLAGLIHHSDRGSQYCAYDYRVIQEQSGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAAQKK
NKW
>Mature_242_residues
AHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPVAPNLLNQTFAPTAPNQVWVAD
LTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPLAGLIHHSDRGSQYCAYDYRVIQEQSGLK
TSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAAQKKN
KW

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=194, Percent_Identity=33.5051546391753, Blast_Score=118, Evalue=6e-27,
Organism=Escherichia coli, GI1788405, Length=231, Percent_Identity=42.8571428571429, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1787263, Length=231, Percent_Identity=42.8571428571429, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1786753, Length=231, Percent_Identity=42.8571428571429, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1786570, Length=231, Percent_Identity=42.8571428571429, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1786490, Length=231, Percent_Identity=42.8571428571429, Blast_Score=181, Evalue=4e-47,
Organism=Escherichia coli, GI1789981, Length=227, Percent_Identity=34.8017621145374, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 28309; Mature: 28178

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPV
CCCCCCCHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCC
APNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTG
CCHHHHCCCCCCCCCEEEEEHEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHH
KALFMALRSQRPLAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFW
HHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHH
GTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAAQKK
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NKW
CCC
>Mature Secondary Structure 
AHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNPNHNLPV
CCCCCCHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHCEECCCCCCCCCCC
APNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTG
CCHHHHCCCCCCCCCEEEEEHEEEEEECCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHH
KALFMALRSQRPLAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSRKGNCYDNAPMESFW
HHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHH
GTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAAQKK
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NKW
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]