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The map label for this gene is glcD [H]

Identifier: 78779783

GI number: 78779783

Start: 1314867

End: 1316222

Strand: Reverse

Name: glcD [H]

Synonym: PMT9312_1399

Alternate gene names: 78779783

Gene position: 1316222-1314867 (Counterclockwise)

Preceding gene: 78779784

Following gene: 78779779

Centisome position: 77.01

GC content: 34.44

Gene sequence:

>1356_bases
ATGACATCAAATAATCTTAAATTTATAGACAAATTTAGGGAAGTTAAAAACTTAGAGATTATTGAAAGCCAATCCGAAGT
AAAAAGACTTTCAAAAGATTTTTATAACTACTCTCCAATCCTTACTGAAAAATTAGATGGATGTATTGCTGATTTTGTGG
TGAGACCTAGTGATCATAATGCGGTGAAGAAAGTAGCAGAAATTTGTTGGAAATTTTCTATCCCTCTTACTTTAAGGGGG
GCAGGTACAGGTAATTATGGACAAGCGGTCCCTTTGTTTAAAGGAGTTGTAATGCAGATGAGTCAGTTTAATAAGTTAGA
AGAATTTGATCCTGAGACAGGTTTTGTGAAAGTACAGTCTGGCTGTGTAATGGGAGATTTGAATAAACAATTAGAGAAAT
ATGGGAGGGAATTAAGGTTGCTTCCTAGTACTTGGAAAACCGCTACAATTGGAGGCTTTATTGCAGGTGGATCAGGAGGT
ATTGGGTCGATTAGGTGGGGATTTTTAAGAGATCCTGGAAATCTTATAGGTTTAGAGGCCGTGACGATGAATGAGAAACC
TGTTTTATTAAAATTTGATGCTGAAGAATCCGAACCTTTAAATCATGCTTATGGGACTAATGGAATTATTACTTCTTTAT
TACTTGCTACTGATATCAAACGTAAGTGGTATTCAATAGTTATCGATTGCATTGAATTTGAACAAACAATAGAAATATTA
AAAACTCTTACTAGCGCCGCAGTTGATATGAAACTGGGAGCAATCCTTGAAGAAGAAATTGTATATCAAATGCCAAGATG
GTTTAAAAGTGAATCTAGAAGTCACAAGATATTAATACAATCTACGCTTGGAGGAATAAAAACGATAGAACTGATTTGCA
AGAAATTCAAAGTTAAATCTACCCTCCTTGGGGAAGAAGAAAAACTCGTTAATGGAATTTCTGAAGTCGTATGGAATCAT
ACAACTCTTCATATGAGGTCTAGGGATAAAAATTGGACATATTTACAGATGCTTTTGCCACTGAATAAAGAACTAGAATT
AATTAATTTTTTGAAAACAAAATGGGGTAAAAAAGTTCTTTGGCATTTAGAAGCAGTTTCTCAGCAAGGATCACCACGAT
TAGCTGCATTGCCAGTATTAAAGTGGAATGGTGTAGAAGAATTAAATGAAATAATAGAAGATTGTAAGAAACTTGGTGCT
TTTATTTTTAATCCCCACGTTTTAACTGTCGAGGGCGGAGGCCTAGGAGTGGTGGACTCTGATCAAGTAAAAGCGAAATT
AAAATTTGATCCTAAAGGGCTATTAAATCCAGGGAAATTAGAGGGTTGGAAAATAAAGGAACAATTTAATATTTAA

Upstream 100 bases:

>100_bases
CAGATGTTTTTTCGAGCACTTTAAAAAGAAAAGTATTTATAAAAGGCGATTTACATTGCTGATCGACTAATTTATATACA
AAACATAAAAAATTTATTTA

Downstream 100 bases:

>100_bases
CATTTCTGTTTATTGGCAAATTTAATAAATTCAGCCACTAAAAAAATAGAACCTGTTAAAACAGGAAGATTAAGGGGCCA
TTTTTGAAGGGCAAATAAAT

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MTSNNLKFIDKFREVKNLEIIESQSEVKRLSKDFYNYSPILTEKLDGCIADFVVRPSDHNAVKKVAEICWKFSIPLTLRG
AGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPETGFVKVQSGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGG
IGSIRWGFLRDPGNLIGLEAVTMNEKPVLLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSIVIDCIEFEQTIEIL
KTLTSAAVDMKLGAILEEEIVYQMPRWFKSESRSHKILIQSTLGGIKTIELICKKFKVKSTLLGEEEKLVNGISEVVWNH
TTLHMRSRDKNWTYLQMLLPLNKELELINFLKTKWGKKVLWHLEAVSQQGSPRLAALPVLKWNGVEELNEIIEDCKKLGA
FIFNPHVLTVEGGGLGVVDSDQVKAKLKFDPKGLLNPGKLEGWKIKEQFNI

Sequences:

>Translated_451_residues
MTSNNLKFIDKFREVKNLEIIESQSEVKRLSKDFYNYSPILTEKLDGCIADFVVRPSDHNAVKKVAEICWKFSIPLTLRG
AGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPETGFVKVQSGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGG
IGSIRWGFLRDPGNLIGLEAVTMNEKPVLLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSIVIDCIEFEQTIEIL
KTLTSAAVDMKLGAILEEEIVYQMPRWFKSESRSHKILIQSTLGGIKTIELICKKFKVKSTLLGEEEKLVNGISEVVWNH
TTLHMRSRDKNWTYLQMLLPLNKELELINFLKTKWGKKVLWHLEAVSQQGSPRLAALPVLKWNGVEELNEIIEDCKKLGA
FIFNPHVLTVEGGGLGVVDSDQVKAKLKFDPKGLLNPGKLEGWKIKEQFNI
>Mature_450_residues
TSNNLKFIDKFREVKNLEIIESQSEVKRLSKDFYNYSPILTEKLDGCIADFVVRPSDHNAVKKVAEICWKFSIPLTLRGA
GTGNYGQAVPLFKGVVMQMSQFNKLEEFDPETGFVKVQSGCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGGI
GSIRWGFLRDPGNLIGLEAVTMNEKPVLLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSIVIDCIEFEQTIEILK
TLTSAAVDMKLGAILEEEIVYQMPRWFKSESRSHKILIQSTLGGIKTIELICKKFKVKSTLLGEEEKLVNGISEVVWNHT
TLHMRSRDKNWTYLQMLLPLNKELELINFLKTKWGKKVLWHLEAVSQQGSPRLAALPVLKWNGVEELNEIIEDCKKLGAF
IFNPHVLTVEGGGLGVVDSDQVKAKLKFDPKGLLNPGKLEGWKIKEQFNI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=209, Percent_Identity=24.8803827751196, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1789351, Length=187, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1787977, Length=173, Percent_Identity=32.9479768786127, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=237, Percent_Identity=27.8481012658228, Blast_Score=75, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6320764, Length=252, Percent_Identity=25.7936507936508, Blast_Score=80, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=251, Percent_Identity=26.2948207171315, Blast_Score=73, Evalue=9e-14,
Organism=Drosophila melanogaster, GI18921117, Length=235, Percent_Identity=24.6808510638298, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24639277, Length=235, Percent_Identity=24.6808510638298, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24639275, Length=235, Percent_Identity=24.6808510638298, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50791; Mature: 50660

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSNNLKFIDKFREVKNLEIIESQSEVKRLSKDFYNYSPILTEKLDGCIADFVVRPSDHN
CCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCH
AVKKVAEICWKFSIPLTLRGAGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPETGFVKVQS
HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGGIGSIRWGFLRDPGNLIGLEA
CCEECHHHHHHHHHCCCEEECCCCCCCEECCCEEECCCCCCCCEEEEEECCCCCEEEEEE
VTMNEKPVLLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSIVIDCIEFEQTIEIL
EEECCCCEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTLTSAAVDMKLGAILEEEIVYQMPRWFKSESRSHKILIQSTLGGIKTIELICKKFKVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
TLLGEEEKLVNGISEVVWNHTTLHMRSRDKNWTYLQMLLPLNKELELINFLKTKWGKKVL
HHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
WHLEAVSQQGSPRLAALPVLKWNGVEELNEIIEDCKKLGAFIFNPHVLTVEGGGLGVVDS
HHHHHHHCCCCCCEEEECEEECCCHHHHHHHHHHHHHHCCEEECCEEEEECCCCCCCCCC
DQVKAKLKFDPKGLLNPGKLEGWKIKEQFNI
CCCEEEEEECCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
TSNNLKFIDKFREVKNLEIIESQSEVKRLSKDFYNYSPILTEKLDGCIADFVVRPSDHN
CCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCH
AVKKVAEICWKFSIPLTLRGAGTGNYGQAVPLFKGVVMQMSQFNKLEEFDPETGFVKVQS
HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
GCVMGDLNKQLEKYGRELRLLPSTWKTATIGGFIAGGSGGIGSIRWGFLRDPGNLIGLEA
CCEECHHHHHHHHHCCCEEECCCCCCCEECCCEEECCCCCCCCEEEEEECCCCCEEEEEE
VTMNEKPVLLKFDAEESEPLNHAYGTNGIITSLLLATDIKRKWYSIVIDCIEFEQTIEIL
EEECCCCEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTLTSAAVDMKLGAILEEEIVYQMPRWFKSESRSHKILIQSTLGGIKTIELICKKFKVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
TLLGEEEKLVNGISEVVWNHTTLHMRSRDKNWTYLQMLLPLNKELELINFLKTKWGKKVL
HHCCCHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
WHLEAVSQQGSPRLAALPVLKWNGVEELNEIIEDCKKLGAFIFNPHVLTVEGGGLGVVDS
HHHHHHHCCCCCCEEEECEEECCCHHHHHHHHHHHHHHCCEEECCEEEEECCCCCCCCCC
DQVKAKLKFDPKGLLNPGKLEGWKIKEQFNI
CCCEEEEEECCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]