| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is arnT [H]
Identifier: 78779661
GI number: 78779661
Start: 1185878
End: 1187683
Strand: Reverse
Name: arnT [H]
Synonym: PMT9312_1278
Alternate gene names: 78779661
Gene position: 1187683-1185878 (Counterclockwise)
Preceding gene: 78779662
Following gene: 78779655
Centisome position: 69.49
GC content: 31.45
Gene sequence:
>1806_bases ATGATTCTTCTTAACTCAAAAAAAAGGCTTATAACCTTATCGATAGTTTTAGTTTGTGGGATCATTATATTTATCTTAGG TTTGGGCACTACAGGACTAGTGGATGAAACTCCTCCTTTATTTGCGGCTGCTGCACGGGCAATGAGTGAATCTGGGGATT GGTTAACGCCAAAAGTCAATGGAATGGCACGTTTTGATAAGCCTCCACTAATATATTGGCTAATGGGTTTTTTTTACTCA TTACCAAAAAACGAGATTTGGGATAGTTTTGGGACAATCTCAGCAAGACTCCCCTCAGCTTTGGGATCATTATTTTTAAT GTTGATGATTGGAGATACGTTGTTTTGTTGGCCACAAAAGGGTGATAGGCAATTCCTCACTCCAATAGTTGCATCATTAG GCTTTGCTTTGTCTCCATTAATAATTATCTGGAGTAGAACTGCTGTGAGTGATGCTCTTTTAACTGGAACTTTAGGTATT AGCCTGCTTTTGTTTTGGAGAAGAATGGCAAGTGAAAATAATGATCAATGCATTTCAGCATGGTTATTTTTAGGGTTTGC AATTTTGACAAAAGGACCTATTGCATTTGTTTTGGCAACATTGACTATTACATCTTTCTTATTTATTCAGAAGGATTGGA AAACGTTGCTCTGCAAGATAAATCCTAGGAAAGGTTTTTTAATAACAATACTAATAAGTGTTCCATGGTACATTTTAGAA CTCATAAAAGAGGGCAAACCTTTTTGGGACAATTTTTTTGGTTATCATAATTTTCAAAGATATACCTCAGTTGTAAATAA TCATGCAGAACCATTCTGGTTTTTTCTTTACATAATGATATTGGCTTCATTACCATTCACTCCCTTTTTATATCATGGGA TATTGCAAGCCTTTAAGGATTTCTTGAAAAGTTCAAAAGAAAGTTGCAATGTCACTGAAACTCTTTATACATATTCTTTA TGTTGGTTAATATCAGTTTTAATCTTTTTTAGTATTTCTGCTACGAAACTACCAAGCTATTGGTTGCCAGCAATTCCAGC AGCGGCAATCTTAATTAGTAACAGCTTTATAAACTTAAAAAAATCAAATAAAAGTTATGTATCTTTATGGATGTTGAATA TTTTAATTTTGTTTGGAGTATCAATAGCATTCTTTTTATCAAATATTTGGTTAAGTTTAATAAATGATCCTGAAATGCCA AATCTTGCATCAGAACTTATAAGCTTTGGGATAATTTTTAAAGCTAAATTGTTCTTTTCTTCATTTACACTTCTTGCAAT AATTTTATTTTCTTTAAAATCCAAAAATATTTTTCTTTATCTTCAAATATTACTTTTAATTGGGCAATCTTTTTTGATGT CGCCAATTAGAAAATTAGCGGATACTTCTAGGCAATTACCTTTGAGGAATATCTCAAAATTAATTTCAGATATTCGTGAA AGGAAGGAAACTTTAGCAATGATCGGGATAAGAAAACCCTCTTTACATTATTATTCGAGACAAATAGTTTTTTATGAACC AAATACTAAAGAAGGATTAATTAATCTTTCAGAAAGGCTAAATACTGATAGGAGAAAAAATTATGAGGATCAACCTGATT ATGAATACAAATCTTTTTTGGTCGTGATTGATGAATATTCTTCGAGCCAAGATCATTGGTCAAATATTAATCATCAAAAA TTGGGCGAATATGGGATTTATAATTTATGGCGAATTCAGAAAAGTGATTTAAATAAGTATTCGGAACTTTTAGTGAATAG TGGTTATAAATCTGACTGGGAAAATAGAAAAGTTGAAAAATTTTAA
Upstream 100 bases:
>100_bases ATGGGTAGAAAAAAATGCCTCCACAGATATATTTGCTAACAAGGTTGTGAACTGGCTTAATAAGGTAATGCACGAATATA AATAAAATAAATAATTTTAA
Downstream 100 bases:
>100_bases CAAAGTCTTTTTTTAAGAAGAGCGTTTTTTAGGTCATCAAGGCTACACTTACTGGGAATTTGAATTTCATTCAAATCTTC GAGTAATTCGAGGTCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MILLNSKKRLITLSIVLVCGIIIFILGLGTTGLVDETPPLFAAAARAMSESGDWLTPKVNGMARFDKPPLIYWLMGFFYS LPKNEIWDSFGTISARLPSALGSLFLMLMIGDTLFCWPQKGDRQFLTPIVASLGFALSPLIIIWSRTAVSDALLTGTLGI SLLLFWRRMASENNDQCISAWLFLGFAILTKGPIAFVLATLTITSFLFIQKDWKTLLCKINPRKGFLITILISVPWYILE LIKEGKPFWDNFFGYHNFQRYTSVVNNHAEPFWFFLYIMILASLPFTPFLYHGILQAFKDFLKSSKESCNVTETLYTYSL CWLISVLIFFSISATKLPSYWLPAIPAAAILISNSFINLKKSNKSYVSLWMLNILILFGVSIAFFLSNIWLSLINDPEMP NLASELISFGIIFKAKLFFSSFTLLAIILFSLKSKNIFLYLQILLLIGQSFLMSPIRKLADTSRQLPLRNISKLISDIRE RKETLAMIGIRKPSLHYYSRQIVFYEPNTKEGLINLSERLNTDRRKNYEDQPDYEYKSFLVVIDEYSSSQDHWSNINHQK LGEYGIYNLWRIQKSDLNKYSELLVNSGYKSDWENRKVEKF
Sequences:
>Translated_601_residues MILLNSKKRLITLSIVLVCGIIIFILGLGTTGLVDETPPLFAAAARAMSESGDWLTPKVNGMARFDKPPLIYWLMGFFYS LPKNEIWDSFGTISARLPSALGSLFLMLMIGDTLFCWPQKGDRQFLTPIVASLGFALSPLIIIWSRTAVSDALLTGTLGI SLLLFWRRMASENNDQCISAWLFLGFAILTKGPIAFVLATLTITSFLFIQKDWKTLLCKINPRKGFLITILISVPWYILE LIKEGKPFWDNFFGYHNFQRYTSVVNNHAEPFWFFLYIMILASLPFTPFLYHGILQAFKDFLKSSKESCNVTETLYTYSL CWLISVLIFFSISATKLPSYWLPAIPAAAILISNSFINLKKSNKSYVSLWMLNILILFGVSIAFFLSNIWLSLINDPEMP NLASELISFGIIFKAKLFFSSFTLLAIILFSLKSKNIFLYLQILLLIGQSFLMSPIRKLADTSRQLPLRNISKLISDIRE RKETLAMIGIRKPSLHYYSRQIVFYEPNTKEGLINLSERLNTDRRKNYEDQPDYEYKSFLVVIDEYSSSQDHWSNINHQK LGEYGIYNLWRIQKSDLNKYSELLVNSGYKSDWENRKVEKF >Mature_601_residues MILLNSKKRLITLSIVLVCGIIIFILGLGTTGLVDETPPLFAAAARAMSESGDWLTPKVNGMARFDKPPLIYWLMGFFYS LPKNEIWDSFGTISARLPSALGSLFLMLMIGDTLFCWPQKGDRQFLTPIVASLGFALSPLIIIWSRTAVSDALLTGTLGI SLLLFWRRMASENNDQCISAWLFLGFAILTKGPIAFVLATLTITSFLFIQKDWKTLLCKINPRKGFLITILISVPWYILE LIKEGKPFWDNFFGYHNFQRYTSVVNNHAEPFWFFLYIMILASLPFTPFLYHGILQAFKDFLKSSKESCNVTETLYTYSL CWLISVLIFFSISATKLPSYWLPAIPAAAILISNSFINLKKSNKSYVSLWMLNILILFGVSIAFFLSNIWLSLINDPEMP NLASELISFGIIFKAKLFFSSFTLLAIILFSLKSKNIFLYLQILLLIGQSFLMSPIRKLADTSRQLPLRNISKLISDIRE RKETLAMIGIRKPSLHYYSRQIVFYEPNTKEGLINLSERLNTDRRKNYEDQPDYEYKSFLVVIDEYSSSQDHWSNINHQK LGEYGIYNLWRIQKSDLNKYSELLVNSGYKSDWENRKVEKF
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=431, Percent_Identity=27.6102088167053, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 69020; Mature: 69020
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLNSKKRLITLSIVLVCGIIIFILGLGTTGLVDETPPLFAAAARAMSESGDWLTPKVN CEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC GMARFDKPPLIYWLMGFFYSLPKNEIWDSFGTISARLPSALGSLFLMLMIGDTLFCWPQK CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCC GDRQFLTPIVASLGFALSPLIIIWSRTAVSDALLTGTLGISLLLFWRRMASENNDQCISA CCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH WLFLGFAILTKGPIAFVLATLTITSFLFIQKDWKTLLCKINPRKGFLITILISVPWYILE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHH LIKEGKPFWDNFFGYHNFQRYTSVVNNHAEPFWFFLYIMILASLPFTPFLYHGILQAFKD HHHCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FLKSSKESCNVTETLYTYSLCWLISVLIFFSISATKLPSYWLPAIPAAAILISNSFINLK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEEE KSNKSYVSLWMLNILILFGVSIAFFLSNIWLSLINDPEMPNLASELISFGIIFKAKLFFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH SFTLLAIILFSLKSKNIFLYLQILLLIGQSFLMSPIRKLADTSRQLPLRNISKLISDIRE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RKETLAMIGIRKPSLHYYSRQIVFYEPNTKEGLINLSERLNTDRRKNYEDQPDYEYKSFL HHHHHHHHCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCEEEE VVIDEYSSSQDHWSNINHQKLGEYGIYNLWRIQKSDLNKYSELLVNSGYKSDWENRKVEK EEEECCCCCCHHHCCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC F C >Mature Secondary Structure MILLNSKKRLITLSIVLVCGIIIFILGLGTTGLVDETPPLFAAAARAMSESGDWLTPKVN CEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC GMARFDKPPLIYWLMGFFYSLPKNEIWDSFGTISARLPSALGSLFLMLMIGDTLFCWPQK CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCC GDRQFLTPIVASLGFALSPLIIIWSRTAVSDALLTGTLGISLLLFWRRMASENNDQCISA CCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH WLFLGFAILTKGPIAFVLATLTITSFLFIQKDWKTLLCKINPRKGFLITILISVPWYILE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHH LIKEGKPFWDNFFGYHNFQRYTSVVNNHAEPFWFFLYIMILASLPFTPFLYHGILQAFKD HHHCCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FLKSSKESCNVTETLYTYSLCWLISVLIFFSISATKLPSYWLPAIPAAAILISNSFINLK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHCCCEEEE KSNKSYVSLWMLNILILFGVSIAFFLSNIWLSLINDPEMPNLASELISFGIIFKAKLFFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH SFTLLAIILFSLKSKNIFLYLQILLLIGQSFLMSPIRKLADTSRQLPLRNISKLISDIRE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RKETLAMIGIRKPSLHYYSRQIVFYEPNTKEGLINLSERLNTDRRKNYEDQPDYEYKSFL HHHHHHHHCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCEEEE VVIDEYSSSQDHWSNINHQKLGEYGIYNLWRIQKSDLNKYSELLVNSGYKSDWENRKVEK EEEECCCCCCHHHCCCCHHHCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA