Click here to switch to the map view.

The map label for this gene is isiB [H]

Identifier: 78779655

GI number: 78779655

Start: 1182568

End: 1183092

Strand: Reverse

Name: isiB [H]

Synonym: PMT9312_1272

Alternate gene names: 78779655

Gene position: 1183092-1182568 (Counterclockwise)

Preceding gene: 78779661

Following gene: 78779654

Centisome position: 69.22

GC content: 39.24

Gene sequence:

>525_bases
ATGACTGTAGGAATTTATTACGCAACTACAACTGGAAAAACTGAAGACGTAGCTGATCGTCTTCATAACTTTATTTCTTC
GGCAGAAGCACCTAAAGATGTATCTGATGTTGATGATCTTTCAGAATTCGAAGGTCTTGATGGAATTATCTGCGGGATAC
CTACTTGGAACACTGGGGCTGATGAAGAAAGATCAGGAACTGCATGGGATTCAATTCTGGAGGATATTGGTGAACTAAGT
TTATCAGGAAAAAAGGTTGCAATTTTTGGTTTAGGAGATTCTTCTACCTACACAGAAAACTATTGTGATGCCATGGAAGA
ACTTCACAGCTACTTCGCTAAAGCAGGTGCCGAAATGGTCGGTTACGTAGATAAATCTTCTTATACGTTTGATGAATCTA
AAAGTATCATTGGAGAAAGCTTTTGTGGATTACCTCTTGATGAGGATAGTGAATCTGATTTAACCGATACACGTCTTGAA
ACATGGGCTTCTCAGCTTAAGGACGAAATCCCTTCATTGGCGTAA

Upstream 100 bases:

>100_bases
TCTTACCTTAAAAAGTATAAAATTTTACATGAAAAAGTTTTTAAAGAAATTAATTTAACGTTTTTAGATTTTATTATTTT
AAGGTAAACATTTTGAAGTT

Downstream 100 bases:

>100_bases
GCTTTCAAAGATATTTACTTTCCCAATTTGTAACATTTGTTCTTTCATAATATGTTTTTTTTACATAAGTAATTAAATCT
GTAAAGAACATGTAAAAACC

Product: flavodoxin FldA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTVGIYYATTTGKTEDVADRLHNFISSAEAPKDVSDVDDLSEFEGLDGIICGIPTWNTGADEERSGTAWDSILEDIGELS
LSGKKVAIFGLGDSSTYTENYCDAMEELHSYFAKAGAEMVGYVDKSSYTFDESKSIIGESFCGLPLDEDSESDLTDTRLE
TWASQLKDEIPSLA

Sequences:

>Translated_174_residues
MTVGIYYATTTGKTEDVADRLHNFISSAEAPKDVSDVDDLSEFEGLDGIICGIPTWNTGADEERSGTAWDSILEDIGELS
LSGKKVAIFGLGDSSTYTENYCDAMEELHSYFAKAGAEMVGYVDKSSYTFDESKSIIGESFCGLPLDEDSESDLTDTRLE
TWASQLKDEIPSLA
>Mature_173_residues
TVGIYYATTTGKTEDVADRLHNFISSAEAPKDVSDVDDLSEFEGLDGIICGIPTWNTGADEERSGTAWDSILEDIGELSL
SGKKVAIFGLGDSSTYTENYCDAMEELHSYFAKAGAEMVGYVDKSSYTFDESKSIIGESFCGLPLDEDSESDLTDTRLET
WASQLKDEIPSLA

Specific function: Low-potential electron donor to a number of redox enzymes [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789262, Length=172, Percent_Identity=33.7209302325581, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI1786900, Length=173, Percent_Identity=33.5260115606936, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226
- InterPro:   IPR010086 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 18903; Mature: 18771

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGIYYATTTGKTEDVADRLHNFISSAEAPKDVSDVDDLSEFEGLDGIICGIPTWNTGA
CEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
DEERSGTAWDSILEDIGELSLSGKKVAIFGLGDSSTYTENYCDAMEELHSYFAKAGAEMV
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYVDKSSYTFDESKSIIGESFCGLPLDEDSESDLTDTRLETWASQLKDEIPSLA
HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVGIYYATTTGKTEDVADRLHNFISSAEAPKDVSDVDDLSEFEGLDGIICGIPTWNTGA
EEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCC
DEERSGTAWDSILEDIGELSLSGKKVAIFGLGDSSTYTENYCDAMEELHSYFAKAGAEMV
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GYVDKSSYTFDESKSIIGESFCGLPLDEDSESDLTDTRLETWASQLKDEIPSLA
HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3121586; 6406674; 10610791; 10610792; 1907844 [H]