Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

Click here to switch to the map view.

The map label for this gene is 78779581

Identifier: 78779581

GI number: 78779581

Start: 1118446

End: 1120614

Strand: Reverse

Name: 78779581

Synonym: PMT9312_1198

Alternate gene names: NA

Gene position: 1120614-1118446 (Counterclockwise)

Preceding gene: 78779582

Following gene: 78779580

Centisome position: 65.56

GC content: 33.61

Gene sequence:

>2169_bases
TTGAAAAAAAATCATAAGAAGCAATTATTAAAAAATGGATTTGCAATTCCCCAGGTTCTTTTACTTGGGATTGGAATAAG
CGTTGCATTAACGGGAATACTTTATACCACGATATTAAATTTAGCCGGGAGCAGATTTAATAGACAGGAATTAATGTCTA
AATCATCTTCTGAATCTGGCATAACAAATATAAGAAACTTACTTAACGATAGTGGTGATAGCTTTTATCATTATTTTTGG
TTAAGTGATAGCTGTTCAGCATCAGCGACTTCTTGTCCTTCAGGAATTAACGTTGGTAATGTTACGATTCCTAATCCACC
TCTAGAATACTGGTCAGATGAGATCTGGTGTAATGGAGCAAGTAACTGTAATGGCAGACAAAAAGCTCCTATGTGTGCAA
GTGGTTCATCTTCTTTGGACCCAAGTCCTATTGATTGGACTACTCATAAATCTATCTTTAATCAATTAATTGATAGTAAC
GAGGATAAAGTAGGTGATGATTTGGTGAATGCAAAAAGAGAATTTTTACAATATTTTGATGTTAAATCAACTGAATATAC
AGGGACGGAAAAATATGGCCTTAGCTCGATAGTAGTAGAAGGGATTGTGAAAAATAAAAAAAATGGACAAAAAACAGGTT
TCAATAAATTAAGAGCAAATATACAAGTAAATAACGATACTCCATTGAGAGGGTTTGGGTTTTTATCTGCAGGAGAAAAT
GAATTAGATGGGGATAATTCTTTATTCCTTGGAAATTTAAATATTATCTCCAGCGAAGGTGATCCAGAGGGGGCAATTAT
CTGGAGAAGAAATATCATAAATGAGGATGATTGCGCAAAAATCATAGAACAAGCTAATGCTAGTAGTGCTTCTCTTCCCA
GCTCAGGAAATGGAGGTTTATGGGTTCAACCACTTGGGTTGCCTAAACAACCAAGATTAAAAAACATTCATGATGTACAA
GGAGTTCTTTTGTGTACCCCTTTAAATTTGCAGAAGCTTCCTACAAATTGTCAATTGCCCAACTCTAGTGGGGCTTCTAA
CTACAGAATTACTTCAATATATGCATCAACTGCCAACTCAAGGTTTGAGGTAACAACTTCAGATTCAAAACCAATAACTC
TTGAAATTTTGGGTGATATAGATGTAAGTAATAATGGAATATTTTGTCACTTTGAAGAGGGTAGTAATGTTTGTGGTTCA
GGTAATCCAAAAAATCTAACTATCTTATTTAAACAAGAGACAAAGTTGTCTGGTAATAAAATTTTTTGCAGCAATGATAA
TACTAAAGGGGGTGTACGACTAGGAGTAAATAAGGTTATTGACTTATCAAAGTCTAGTTTTGATAATGACAATTTACCTG
GAAGCAGTATTTTTATAGATAACACAGGTTGGTCATCTTCTGAAAGGTTTGGAGCTTTTTTATTGGGACCTAAAACAACT
TTCATTTCTACATGGGCAAAGAGCCCGTGGGTTCAATATACAGAATCAAATCTTAGTAATGAAAATGAAAGAGCACCAAT
GATAGTCTCGCATAGAGGAACATACGGTTGGATTTTAGATTCGTCTGGAGGGAGAGATAATCGCTGGCATGACAAAATGA
CAAATCTTATTCTTACTAAAGATGGCTATTTAATTCCTTATTTGAATTTTACTGAAGGTGGGAATTCCCTAGAAATTATT
GGGATTGGGTATGATGAAGAATATCAAAATTATTCCCGTTCATCAGAACCTAAGACAGGTAAATTTTTAATTTATAACGT
AGATAATAATAATTATTACCTCAGAAGTTTTAGAATTACAGATAATTTAAACCCTAGTAATAAGAGAAGTAGCTTAGGAT
TTTTCCCATGGGCAGCAGCTGTAATGGAAGATGAATTGATTCTTTTAGATAGTGCTGCGAACTTAAATCAAGGTGAATCT
AAGAATTTGCTTGATCAATATAATATTAAGTTAGAGCCTAGGAGTGATAACAGAACTAAAAGGTTTTCAGGCGCTGCGTG
GGTGAAAAATTTATGTTTTGATAAAAATTCAAGCCAAACCTGGGAATTTGATAATCAATTTATTGATGGCATTAAATCTA
GATATGGAAATGACTTTAACTATGGAGTTAAGTTTTATAGAGGCAGATCTATTATTCTTTGGGATACACTAAAAGATTTT
GAAAGTTAA

Upstream 100 bases:

>100_bases
GCGGTACAGGTTCTGATGGAGCGTAAGGCTAATTTCTTTTTTTTAGTTGATAAAGACATATAAACTTAATTAAGGATTTA
TTCTTTCATAGTTTAGGTTT

Downstream 100 bases:

>100_bases
TATGCAAAAAAGTGAGTATTTTTATTTAAAAAAAAATTACTCCTCAGGCTTTGGATTGGTTGACTCAATTGTAAGTATTT
CATTATTGGGTATAGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MKKNHKKQLLKNGFAIPQVLLLGIGISVALTGILYTTILNLAGSRFNRQELMSKSSSESGITNIRNLLNDSGDSFYHYFW
LSDSCSASATSCPSGINVGNVTIPNPPLEYWSDEIWCNGASNCNGRQKAPMCASGSSSLDPSPIDWTTHKSIFNQLIDSN
EDKVGDDLVNAKREFLQYFDVKSTEYTGTEKYGLSSIVVEGIVKNKKNGQKTGFNKLRANIQVNNDTPLRGFGFLSAGEN
ELDGDNSLFLGNLNIISSEGDPEGAIIWRRNIINEDDCAKIIEQANASSASLPSSGNGGLWVQPLGLPKQPRLKNIHDVQ
GVLLCTPLNLQKLPTNCQLPNSSGASNYRITSIYASTANSRFEVTTSDSKPITLEILGDIDVSNNGIFCHFEEGSNVCGS
GNPKNLTILFKQETKLSGNKIFCSNDNTKGGVRLGVNKVIDLSKSSFDNDNLPGSSIFIDNTGWSSSERFGAFLLGPKTT
FISTWAKSPWVQYTESNLSNENERAPMIVSHRGTYGWILDSSGGRDNRWHDKMTNLILTKDGYLIPYLNFTEGGNSLEII
GIGYDEEYQNYSRSSEPKTGKFLIYNVDNNNYYLRSFRITDNLNPSNKRSSLGFFPWAAAVMEDELILLDSAANLNQGES
KNLLDQYNIKLEPRSDNRTKRFSGAAWVKNLCFDKNSSQTWEFDNQFIDGIKSRYGNDFNYGVKFYRGRSIILWDTLKDF
ES

Sequences:

>Translated_722_residues
MKKNHKKQLLKNGFAIPQVLLLGIGISVALTGILYTTILNLAGSRFNRQELMSKSSSESGITNIRNLLNDSGDSFYHYFW
LSDSCSASATSCPSGINVGNVTIPNPPLEYWSDEIWCNGASNCNGRQKAPMCASGSSSLDPSPIDWTTHKSIFNQLIDSN
EDKVGDDLVNAKREFLQYFDVKSTEYTGTEKYGLSSIVVEGIVKNKKNGQKTGFNKLRANIQVNNDTPLRGFGFLSAGEN
ELDGDNSLFLGNLNIISSEGDPEGAIIWRRNIINEDDCAKIIEQANASSASLPSSGNGGLWVQPLGLPKQPRLKNIHDVQ
GVLLCTPLNLQKLPTNCQLPNSSGASNYRITSIYASTANSRFEVTTSDSKPITLEILGDIDVSNNGIFCHFEEGSNVCGS
GNPKNLTILFKQETKLSGNKIFCSNDNTKGGVRLGVNKVIDLSKSSFDNDNLPGSSIFIDNTGWSSSERFGAFLLGPKTT
FISTWAKSPWVQYTESNLSNENERAPMIVSHRGTYGWILDSSGGRDNRWHDKMTNLILTKDGYLIPYLNFTEGGNSLEII
GIGYDEEYQNYSRSSEPKTGKFLIYNVDNNNYYLRSFRITDNLNPSNKRSSLGFFPWAAAVMEDELILLDSAANLNQGES
KNLLDQYNIKLEPRSDNRTKRFSGAAWVKNLCFDKNSSQTWEFDNQFIDGIKSRYGNDFNYGVKFYRGRSIILWDTLKDF
ES
>Mature_722_residues
MKKNHKKQLLKNGFAIPQVLLLGIGISVALTGILYTTILNLAGSRFNRQELMSKSSSESGITNIRNLLNDSGDSFYHYFW
LSDSCSASATSCPSGINVGNVTIPNPPLEYWSDEIWCNGASNCNGRQKAPMCASGSSSLDPSPIDWTTHKSIFNQLIDSN
EDKVGDDLVNAKREFLQYFDVKSTEYTGTEKYGLSSIVVEGIVKNKKNGQKTGFNKLRANIQVNNDTPLRGFGFLSAGEN
ELDGDNSLFLGNLNIISSEGDPEGAIIWRRNIINEDDCAKIIEQANASSASLPSSGNGGLWVQPLGLPKQPRLKNIHDVQ
GVLLCTPLNLQKLPTNCQLPNSSGASNYRITSIYASTANSRFEVTTSDSKPITLEILGDIDVSNNGIFCHFEEGSNVCGS
GNPKNLTILFKQETKLSGNKIFCSNDNTKGGVRLGVNKVIDLSKSSFDNDNLPGSSIFIDNTGWSSSERFGAFLLGPKTT
FISTWAKSPWVQYTESNLSNENERAPMIVSHRGTYGWILDSSGGRDNRWHDKMTNLILTKDGYLIPYLNFTEGGNSLEII
GIGYDEEYQNYSRSSEPKTGKFLIYNVDNNNYYLRSFRITDNLNPSNKRSSLGFFPWAAAVMEDELILLDSAANLNQGES
KNLLDQYNIKLEPRSDNRTKRFSGAAWVKNLCFDKNSSQTWEFDNQFIDGIKSRYGNDFNYGVKFYRGRSIILWDTLKDF
ES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80119; Mature: 80119

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNHKKQLLKNGFAIPQVLLLGIGISVALTGILYTTILNLAGSRFNRQELMSKSSSESG
CCCCHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCH
ITNIRNLLNDSGDSFYHYFWLSDSCSASATSCPSGINVGNVTIPNPPLEYWSDEIWCNGA
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCEEEECCC
SNCNGRQKAPMCASGSSSLDPSPIDWTTHKSIFNQLIDSNEDKVGDDLVNAKREFLQYFD
CCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
VKSTEYTGTEKYGLSSIVVEGIVKNKKNGQKTGFNKLRANIQVNNDTPLRGFGFLSAGEN
CCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCC
ELDGDNSLFLGNLNIISSEGDPEGAIIWRRNIINEDDCAKIIEQANASSASLPSSGNGGL
CCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCE
WVQPLGLPKQPRLKNIHDVQGVLLCTPLNLQKLPTNCQLPNSSGASNYRITSIYASTANS
EEEECCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC
RFEVTTSDSKPITLEILGDIDVSNNGIFCHFEEGSNVCGSGNPKNLTILFKQETKLSGNK
EEEEEECCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCE
IFCSNDNTKGGVRLGVNKVIDLSKSSFDNDNLPGSSIFIDNTGWSSSERFGAFLLGPKTT
EEECCCCCCCCEEECCHHHEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHH
FISTWAKSPWVQYTESNLSNENERAPMIVSHRGTYGWILDSSGGRDNRWHDKMTNLILTK
EEEHHCCCCCEEEHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHCEEEEEC
DGYLIPYLNFTEGGNSLEIIGIGYDEEYQNYSRSSEPKTGKFLIYNVDNNNYYLRSFRIT
CCCEEEEEEECCCCCEEEEEEECCCHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEE
DNLNPSNKRSSLGFFPWAAAVMEDELILLDSAANLNQGESKNLLDQYNIKLEPRSDNRTK
CCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCEEEECCCCCCCH
RFSGAAWVKNLCFDKNSSQTWEFDNQFIDGIKSRYGNDFNYGVKFYRGRSIILWDTLKDF
HCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECHHHH
ES
CC
>Mature Secondary Structure
MKKNHKKQLLKNGFAIPQVLLLGIGISVALTGILYTTILNLAGSRFNRQELMSKSSSESG
CCCCHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCH
ITNIRNLLNDSGDSFYHYFWLSDSCSASATSCPSGINVGNVTIPNPPLEYWSDEIWCNGA
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHCCCEEEECCC
SNCNGRQKAPMCASGSSSLDPSPIDWTTHKSIFNQLIDSNEDKVGDDLVNAKREFLQYFD
CCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
VKSTEYTGTEKYGLSSIVVEGIVKNKKNGQKTGFNKLRANIQVNNDTPLRGFGFLSAGEN
CCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCC
ELDGDNSLFLGNLNIISSEGDPEGAIIWRRNIINEDDCAKIIEQANASSASLPSSGNGGL
CCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCE
WVQPLGLPKQPRLKNIHDVQGVLLCTPLNLQKLPTNCQLPNSSGASNYRITSIYASTANS
EEEECCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC
RFEVTTSDSKPITLEILGDIDVSNNGIFCHFEEGSNVCGSGNPKNLTILFKQETKLSGNK
EEEEEECCCCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCE
IFCSNDNTKGGVRLGVNKVIDLSKSSFDNDNLPGSSIFIDNTGWSSSERFGAFLLGPKTT
EEECCCCCCCCEEECCHHHEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCHH
FISTWAKSPWVQYTESNLSNENERAPMIVSHRGTYGWILDSSGGRDNRWHDKMTNLILTK
EEEHHCCCCCEEEHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHCEEEEEC
DGYLIPYLNFTEGGNSLEIIGIGYDEEYQNYSRSSEPKTGKFLIYNVDNNNYYLRSFRIT
CCCEEEEEEECCCCCEEEEEEECCCHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEE
DNLNPSNKRSSLGFFPWAAAVMEDELILLDSAANLNQGESKNLLDQYNIKLEPRSDNRTK
CCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHCCEEEECCCCCCCH
RFSGAAWVKNLCFDKNSSQTWEFDNQFIDGIKSRYGNDFNYGVKFYRGRSIILWDTLKDF
HCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECHHHH
ES
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA