| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78779221
Identifier: 78779221
GI number: 78779221
Start: 773586
End: 774812
Strand: Reverse
Name: 78779221
Synonym: PMT9312_0837
Alternate gene names: NA
Gene position: 774812-773586 (Counterclockwise)
Preceding gene: 78779228
Following gene: 78779216
Centisome position: 45.33
GC content: 34.15
Gene sequence:
>1227_bases ATGGACTTTCAACAAGGGTTAATCACAACAATACATGAATATGGAGTAACTAGCGATTTACTTAAAGAATTAAATAAAAG TCTTAAAAAAAGATCAACTAGCATTTTAATACCTTGCTTATATGAAGAATTTGAACGCCCAGCATTAAAAGATATAAGAG AAGTTTTAAAAAATCTTACAGGCTTAAATGAATTAGTTATTGCTCTCTCTGCAAAAACTGTTGAGCAAGTAAAGGCAGCA AAATTATTTTTTGACTCAATGCCATTCCCAGTTCACGTTCAATGGACTAATTCTCCTTCTGTAATAGAACTCTTAAAAAA CCAGGAAAAAAATGGGTTAGAACTTTTAGGAACTCCAGGTAAAGGATGGGCTGTTTGGCAAGGCATAGGAGTTGCTACTA GAAAATCAGAAGTTGTTGCTCTTTTTGATGCAGATATAAGAACTTTTAGTCCTTTGTATCCTTCAAGGATGATACTTCCG CTTCTAGATGAATCATATGGAATATCTTACGTTAAAGCTTTTTACAGTAGATTATCATTAGAAACTAATCAATTACAAGG TAGAGCAACAAGATTATTTGTAGGTCCTTTATTAGCAAGTCTTGAGCAGTTAGTTGGGAAGGGTCCCTTTTTACAATATC TACAATCATTTAGATATCCATTGGCAGGTGAGTTTGCTTTTACTAAAGACCTTGCAATGAATTTAAGAATACCTTGTGAC TGGGGTTTAGAGATAGGTTTATTATCAGAAGTTTATAGAAACGTAAGAACCTCAAAGATAGCCCAAGTTGACTTAGGTTT ATTTGATCATAAACATAAGAATATTGGAGATTCTTCTAAAGAAGGATTACAAAAAATGTGTACAGAAATACTTTCAAGTG TTTTAAGAGGTCTCATGGAGCATCAAGCAGAGACCTTAACTAGCACTCAACTAGCAACATTAGAAGTTCTTTATAAGAGA GTTGGTGAAGATCGGGTAAAACAATTTGGGTTAGATTCAGCAGTTAATCAACTTCCATACGATAGGCACGAAGAAGAACT CTCAGTACAAAAATTTGCCAAACTATTGAGACCTGCAACAGAAGATTACCTAACTTGCCCTACTACACAGCAATTACCAA GTTGGTCGAGAGTTCTATCTTGTGAAAACAAACTGCAAGAGGATCTAGCTATCGCAGGGTCAAAAGACATAAAGGCAAGT GAAAAAGAATTAATTAAAAACTTCTAA
Upstream 100 bases:
>100_bases TTATAAAGTTTTGATCTATCTAATTTTTTCTCTGAATCAATTTGCTTCACTTTGAAAAAATTGTCGAAGTATTAACACTA TTCTGCACATCAATTAGAAA
Downstream 100 bases:
>100_bases AGCAAAAAATACCTCTGCGCCATTGGAACTTCATTAAGTGGCTCACAAGTAAGAAGTTCTCCATCGGAAAATACTTCGTA AGTTTCTGGATCAACTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glucosyl-3-Phosphoglycerate Synthase; Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase Family Protein; Group 2 Family Glycosyl Transferase; Glycosyltransferase Family Protein; Family 2 Glycosyl Transferase Protein; Polypeptide N-Acetylgalactosaminyltransferase; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MDFQQGLITTIHEYGVTSDLLKELNKSLKKRSTSILIPCLYEEFERPALKDIREVLKNLTGLNELVIALSAKTVEQVKAA KLFFDSMPFPVHVQWTNSPSVIELLKNQEKNGLELLGTPGKGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILP LLDESYGISYVKAFYSRLSLETNQLQGRATRLFVGPLLASLEQLVGKGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKNIGDSSKEGLQKMCTEILSSVLRGLMEHQAETLTSTQLATLEVLYKR VGEDRVKQFGLDSAVNQLPYDRHEEELSVQKFAKLLRPATEDYLTCPTTQQLPSWSRVLSCENKLQEDLAIAGSKDIKAS EKELIKNF
Sequences:
>Translated_408_residues MDFQQGLITTIHEYGVTSDLLKELNKSLKKRSTSILIPCLYEEFERPALKDIREVLKNLTGLNELVIALSAKTVEQVKAA KLFFDSMPFPVHVQWTNSPSVIELLKNQEKNGLELLGTPGKGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILP LLDESYGISYVKAFYSRLSLETNQLQGRATRLFVGPLLASLEQLVGKGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKNIGDSSKEGLQKMCTEILSSVLRGLMEHQAETLTSTQLATLEVLYKR VGEDRVKQFGLDSAVNQLPYDRHEEELSVQKFAKLLRPATEDYLTCPTTQQLPSWSRVLSCENKLQEDLAIAGSKDIKAS EKELIKNF >Mature_408_residues MDFQQGLITTIHEYGVTSDLLKELNKSLKKRSTSILIPCLYEEFERPALKDIREVLKNLTGLNELVIALSAKTVEQVKAA KLFFDSMPFPVHVQWTNSPSVIELLKNQEKNGLELLGTPGKGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILP LLDESYGISYVKAFYSRLSLETNQLQGRATRLFVGPLLASLEQLVGKGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKNIGDSSKEGLQKMCTEILSSVLRGLMEHQAETLTSTQLATLEVLYKR VGEDRVKQFGLDSAVNQLPYDRHEEELSVQKFAKLLRPATEDYLTCPTTQQLPSWSRVLSCENKLQEDLAIAGSKDIKAS EKELIKNF
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46008; Mature: 46008
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFQQGLITTIHEYGVTSDLLKELNKSLKKRSTSILIPCLYEEFERPALKDIREVLKNLT CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHC GLNELVIALSAKTVEQVKAAKLFFDSMPFPVHVQWTNSPSVIELLKNQEKNGLELLGTPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCC KGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILPLLDESYGISYVKAFYSRLSL CCCCCEECCCCEECCCCEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC ETNQLQGRATRLFVGPLLASLEQLVGKGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD CHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCC WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKNIGDSSKEGLQKMCTEILSSVLRGLME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HQAETLTSTQLATLEVLYKRVGEDRVKQFGLDSAVNQLPYDRHEEELSVQKFAKLLRPAT HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC EDYLTCPTTQQLPSWSRVLSCENKLQEDLAIAGSKDIKASEKELIKNF CCCEECCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC >Mature Secondary Structure MDFQQGLITTIHEYGVTSDLLKELNKSLKKRSTSILIPCLYEEFERPALKDIREVLKNLT CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHC GLNELVIALSAKTVEQVKAAKLFFDSMPFPVHVQWTNSPSVIELLKNQEKNGLELLGTPG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCC KGWAVWQGIGVATRKSEVVALFDADIRTFSPLYPSRMILPLLDESYGISYVKAFYSRLSL CCCCCEECCCCEECCCCEEEEEECCHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC ETNQLQGRATRLFVGPLLASLEQLVGKGPFLQYLQSFRYPLAGEFAFTKDLAMNLRIPCD CHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCC WGLEIGLLSEVYRNVRTSKIAQVDLGLFDHKHKNIGDSSKEGLQKMCTEILSSVLRGLME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HQAETLTSTQLATLEVLYKRVGEDRVKQFGLDSAVNQLPYDRHEEELSVQKFAKLLRPAT HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC EDYLTCPTTQQLPSWSRVLSCENKLQEDLAIAGSKDIKASEKELIKNF CCCEECCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA