Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78779167
Identifier: 78779167
GI number: 78779167
Start: 731233
End: 731523
Strand: Reverse
Name: 78779167
Synonym: PMT9312_0783
Alternate gene names: NA
Gene position: 731523-731233 (Counterclockwise)
Preceding gene: 78779168
Following gene: 78779166
Centisome position: 42.8
GC content: 36.43
Gene sequence:
>291_bases ATGTCTGAATACAGAGATTCGTCTTCAAATAATCTTTTATCATTAATAAGCGGTGCTTTTATTGGAGCAGCAGGTCTAGC TTGGTGGTTAATATCCGAAGCAGACAAAAGAAAGGAGGAAAAAAAACAAAAAGCAATGATGTATTCCTCCAGAATTCAAG ACGGCTCTGAAGCAATTGATTCAAATGAAAATATAAATGAAGTTGAAGGAGAAAATCTGGAGAAGAAAGTTGAGCAACTT AATTCTGCAATTGCTGATGTGAGGAAGCAACTTGAAGAGTTGGGGCAATAG
Upstream 100 bases:
>100_bases CACAAGTTTTAGTACCGGGTATTGGGAATCCTTTATCGAGATTAAGTACTATATTTCAAGATAAGAACTAATATAGAATA TAGGAGTAAATATTTAACCA
Downstream 100 bases:
>100_bases AATAAAAAAGGTTCACAAATAATATGAATAAACTCAGATCATCTGCAATAACCCAAGGTGTGCAAAGATCCCCTAACAGA TCGATGTTAAGAGCTGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSEYRDSSSNNLLSLISGAFIGAAGLAWWLISEADKRKEEKKQKAMMYSSRIQDGSEAIDSNENINEVEGENLEKKVEQL NSAIADVRKQLEELGQ
Sequences:
>Translated_96_residues MSEYRDSSSNNLLSLISGAFIGAAGLAWWLISEADKRKEEKKQKAMMYSSRIQDGSEAIDSNENINEVEGENLEKKVEQL NSAIADVRKQLEELGQ >Mature_95_residues SEYRDSSSNNLLSLISGAFIGAAGLAWWLISEADKRKEEKKQKAMMYSSRIQDGSEAIDSNENINEVEGENLEKKVEQLN SAIADVRKQLEELGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10736; Mature: 10605
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYRDSSSNNLLSLISGAFIGAAGLAWWLISEADKRKEEKKQKAMMYSSRIQDGSEAID CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC SNENINEVEGENLEKKVEQLNSAIADVRKQLEELGQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEYRDSSSNNLLSLISGAFIGAAGLAWWLISEADKRKEEKKQKAMMYSSRIQDGSEAID CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC SNENINEVEGENLEKKVEQLNSAIADVRKQLEELGQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA