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The map label for this gene is petN

Identifier: 78779132

GI number: 78779132

Start: 694454

End: 694555

Strand: Direct

Name: petN

Synonym: PMT9312_0748

Alternate gene names: 78779132

Gene position: 694454-694555 (Clockwise)

Preceding gene: 78779130

Following gene: 78779134

Centisome position: 40.63

GC content: 39.22

Gene sequence:

>102_bases
ATGATCTTTCAAATAGGATGGGCTGCATTAGCTGCAATTTTTACTTTTTCCATTGCAATGGTTGTTTGGGGAAGAAATGG
TGACGGCTCCATTGACATATGA

Upstream 100 bases:

>100_bases
TTCTATTTAGAAAATTTTGTTTCTGAGAAATTAACTTTATCTTAGAAATGATTAAAAATTTTTGAAGTTCTGTTATATTT
AGAAAAGTAATTTAAATCAA

Downstream 100 bases:

>100_bases
TTTCATTTTTAACTTATGAAATCTATTTAAATAAATTTCTTATTTTAACATCGTTTGTTTTACTTATATTCATAACATTC
GCCGTAATTTATATCTCTTA

Product: cytochrome b6-f complex subunit PetN

Products: NA

Alternate protein names: Cytochrome b6-f complex subunit VIII; Cytochrome b6-f complex subunit petN

Number of amino acids: Translated: 33; Mature: 33

Protein sequence:

>33_residues
MIFQIGWAALAAIFTFSIAMVVWGRNGDGSIDI

Sequences:

>Translated_33_residues
MIFQIGWAALAAIFTFSIAMVVWGRNGDGSIDI
>Mature_33_residues
MIFQIGWAALAAIFTFSIAMVVWGRNGDGSIDI

Specific function: Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the petN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PETN_PROMP (Q7V1W2)

Other databases:

- EMBL:   BX548174
- RefSeq:   NP_892858.1
- ProteinModelPortal:   Q7V1W2
- SMR:   Q7V1W2
- STRING:   Q7V1W2
- GeneID:   1726997
- GenomeReviews:   BX548174_GR
- KEGG:   pmm:PMM0740
- HOGENOM:   HBG636553
- ProtClustDB:   PRK02529
- BioCyc:   PMAR167540:PMM0740-MONOMER
- GO:   GO:0015979
- GO:   GO:0006810
- HAMAP:   MF_00395
- InterPro:   IPR005497

Pfam domain/function: PF03742 PetN; SSF103451 PetN

EC number: NA

Molecular weight: Translated: 3572; Mature: 3572

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xffbf36c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFQIGWAALAAIFTFSIAMVVWGRNGDGSIDI
CEEEEHHHHHHHHHHHHHHHEEECCCCCCCCCH
>Mature Secondary Structure
MIFQIGWAALAAIFTFSIAMVVWGRNGDGSIDI
CEEEEHHHHHHHHHHHHHHHEEECCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12917642