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The map label for this gene is 78779060

Identifier: 78779060

GI number: 78779060

Start: 636754

End: 637257

Strand: Direct

Name: 78779060

Synonym: PMT9312_0675

Alternate gene names: NA

Gene position: 636754-637257 (Clockwise)

Preceding gene: 78779054

Following gene: 78779061

Centisome position: 37.25

GC content: 32.34

Gene sequence:

>504_bases
GTGAAAAGGTTAGTTATTGGGAGAGGAAGTGTATTTGCAGATTTGTTAATAATTGGTGAGGCACCTGGAGCACAGGAAGA
CTTAGAAGGAAAACCATATGTAGGTAAATCCGGTAAGTTATTAAACGAATTGTTGATAAAAGCGGGGATTGACTATAAGG
AAGATGTTTATTTTTGCAATGTAATTAAATGTCGTCCACCAAATAATAGAAAACCCACTGCTAGAGAAATTAATATTCAT
AAACCTTGGTTATTACAGCAAATAAAGCTAGTTGATCCAAAATTTATATTACTTACTGGTTCGACTGCTATGAGAGCTAT
TTTAGAAGTTAAAGATCCTATAAGTAATTTGAGAGGTCAATGGATTAAAAAAGATGGGAGAGAAATTATGGTAATTTTTC
ATCCATCTTATTTGTTGAGATTTCCTTCTAAAGAAATCAATAAACCTTACCATCTAACTTTGAAAGACCTAGAGAATTTA
GGTGGTAAACTATATGCCGTATAA

Upstream 100 bases:

>100_bases
AAAACTATCACATAATGGTTTAATTTAGTTCATTTTCTTAATCTATTTTATTTTCATGTTTTGAGCTCTTAAGATAAAAG
TATTTAAAGTTTTATTTTTG

Downstream 100 bases:

>100_bases
TTTAGTGAACCCTTTTTGAATATCAAGAATTTTAATGTCATTAACTCAATCAAAAGAGGTTAACAGTCTCTCCAAAAGAT
ATTCAACTCATATTGAGAGA

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; DNA Glycosylase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCNVIKCRPPNNRKPTAREINIH
KPWLLQQIKLVDPKFILLTGSTAMRAILEVKDPISNLRGQWIKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENL
GGKLYAV

Sequences:

>Translated_167_residues
MKRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCNVIKCRPPNNRKPTAREINIH
KPWLLQQIKLVDPKFILLTGSTAMRAILEVKDPISNLRGQWIKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENL
GGKLYAV
>Mature_167_residues
MKRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCNVIKCRPPNNRKPTAREINIH
KPWLLQQIKLVDPKFILLTGSTAMRAILEVKDPISNLRGQWIKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENL
GGKLYAV

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 18965; Mature: 18965

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCN
CCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
VIKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVKDPISNLRGQ
EEEECCCCCCCCCCEEEECCCCHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHCCH
WIKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENLGGKLYAV
HCCCCCCEEEEEECCHHEEECCHHHCCCCEEEEHHHHHCCCCEEEEC
>Mature Secondary Structure
MKRLVIGRGSVFADLLIIGEAPGAQEDLEGKPYVGKSGKLLNELLIKAGIDYKEDVYFCN
CCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
VIKCRPPNNRKPTAREINIHKPWLLQQIKLVDPKFILLTGSTAMRAILEVKDPISNLRGQ
EEEECCCCCCCCCCEEEECCCCHHHHHHEECCCEEEEEECCHHHHHHHHHHHHHHHHCCH
WIKKDGREIMVIFHPSYLLRFPSKEINKPYHLTLKDLENLGGKLYAV
HCCCCCCEEEEEECCHHEEECCHHHCCCCEEEEHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA