Click here to switch to the map view.

The map label for this gene is 78778990

Identifier: 78778990

GI number: 78778990

Start: 569573

End: 569908

Strand: Reverse

Name: 78778990

Synonym: PMT9312_0605

Alternate gene names: NA

Gene position: 569908-569573 (Counterclockwise)

Preceding gene: 78778991

Following gene: 78778984

Centisome position: 33.34

GC content: 29.46

Gene sequence:

>336_bases
ATGTTTAATCCAGAATTTCTTGCTACTGAAAATAATGATCCAAATGATGAGAATGATTTAATCCAATATTTACAAAAACA
ATCTCCAGAAGTTTTGCAAAGAATAGCAAAATCAGCTAGTGAAGATATTCAAGAAATTATTAGACATAATGTTCAAGGTC
TTCTTGGAATGCTTCCTTCAGATCAATTTGATGTGAAAATAACATCTTCAAAAGACAACATTGCCAATTTATTATCTTCA
GCAATGATGACAGGATATTTCTTAAGACAAATGGAGCAAAGAAAAGAGCTGGAACAAACTCTTAAAAATGATGAAAATAT
GTCGATTGAAGAATAA

Upstream 100 bases:

>100_bases
GCCTTTTAATAAAATTGGACCTATTCGGTTCCCTACCCTTAATAATTTAGATTAATGGGTACGTGATGTTGTAGGGTTTT
TATATCTTGAAGTTGTAGAA

Downstream 100 bases:

>100_bases
TAAGTTTTTAGAGATTAACTTTTTCAGGAATTATTCCTAGTTCAAACAACTTTTTATATAAACCCATTAAAAATTTATTA
TCCTCTGGTAGTTTGTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRIAKSASEDIQEIIRHNVQGLLGMLPSDQFDVKITSSKDNIANLLSS
AMMTGYFLRQMEQRKELEQTLKNDENMSIEE

Sequences:

>Translated_111_residues
MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRIAKSASEDIQEIIRHNVQGLLGMLPSDQFDVKITSSKDNIANLLSS
AMMTGYFLRQMEQRKELEQTLKNDENMSIEE
>Mature_111_residues
MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRIAKSASEDIQEIIRHNVQGLLGMLPSDQFDVKITSSKDNIANLLSS
AMMTGYFLRQMEQRKELEQTLKNDENMSIEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12808; Mature: 12808

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRIAKSASEDIQEIIRHNVQGLLGMLPS
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DQFDVKITSSKDNIANLLSSAMMTGYFLRQMEQRKELEQTLKNDENMSIEE
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFNPEFLATENNDPNDENDLIQYLQKQSPEVLQRIAKSASEDIQEIIRHNVQGLLGMLPS
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DQFDVKITSSKDNIANLLSSAMMTGYFLRQMEQRKELEQTLKNDENMSIEE
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA