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The map label for this gene is 78778973

Identifier: 78778973

GI number: 78778973

Start: 548252

End: 548695

Strand: Reverse

Name: 78778973

Synonym: PMT9312_0588

Alternate gene names: NA

Gene position: 548695-548252 (Counterclockwise)

Preceding gene: 78778978

Following gene: 78778972

Centisome position: 32.1

GC content: 29.5

Gene sequence:

>444_bases
ATGTCTTTTTTTGAACTATTAGGGAACACACCCAAAATCTTTGGATTTCTTGGAATATTCCTTTTATGCGTTACTGTAAT
AGCCTTTATATTTAATTTTGGTTTTAAATTTCGAATAATAGGAGCAACCATTTTCTCATTATTACTTTCTTTAAGCAGTT
GGGCATTTATACAAAGTTATACTCAAAAAATAGTAATAGAAGATGCAAAATATGTCCCAATTGTTTATGACAATGGGTTC
GATTTGATTATTGCTAAATCAGATGATGATTTTCCAGAAGAGTCAATTGAACCAACTTTAAAACAATTATCGGAAAACTT
AAGGAAAGGTAGCAGATCTGGTGCGAATGTAAAAATAAAGATAAGAAAACTTGAAAAAATTTCAGATGGTGTAAGTAAAC
CAGTGGTTATAGGAGAAATTCAGAAAAATGTCAAAATGAACTAG

Upstream 100 bases:

>100_bases
TTTTGTATTTAAATTTAGAGATCTAATTTTTTTCAAGTTAGAGCCCAAAAATAGAGTAGGCTTACAAAATATAAGAAATT
AATCAGGTCAAAGCCACTAA

Downstream 100 bases:

>100_bases
TCTGTTACACAATGGAAAGCAAAACCTTTTTAGATTTTTTGCCAACTAACTTTAGACATGAGAAATCTTTTTTAATTCAA
AATAATCTAACTGACTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSFFELLGNTPKIFGFLGIFLLCVTVIAFIFNFGFKFRIIGATIFSLLLSLSSWAFIQSYTQKIVIEDAKYVPIVYDNGF
DLIIAKSDDDFPEESIEPTLKQLSENLRKGSRSGANVKIKIRKLEKISDGVSKPVVIGEIQKNVKMN

Sequences:

>Translated_147_residues
MSFFELLGNTPKIFGFLGIFLLCVTVIAFIFNFGFKFRIIGATIFSLLLSLSSWAFIQSYTQKIVIEDAKYVPIVYDNGF
DLIIAKSDDDFPEESIEPTLKQLSENLRKGSRSGANVKIKIRKLEKISDGVSKPVVIGEIQKNVKMN
>Mature_146_residues
SFFELLGNTPKIFGFLGIFLLCVTVIAFIFNFGFKFRIIGATIFSLLLSLSSWAFIQSYTQKIVIEDAKYVPIVYDNGFD
LIIAKSDDDFPEESIEPTLKQLSENLRKGSRSGANVKIKIRKLEKISDGVSKPVVIGEIQKNVKMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16535; Mature: 16403

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFELLGNTPKIFGFLGIFLLCVTVIAFIFNFGFKFRIIGATIFSLLLSLSSWAFIQSY
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
TQKIVIEDAKYVPIVYDNGFDLIIAKSDDDFPEESIEPTLKQLSENLRKGSRSGANVKIK
HHHHEECCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
IRKLEKISDGVSKPVVIGEIQKNVKMN
EEHHHHHHCCCCCCEEEEEHHHCCCCC
>Mature Secondary Structure 
SFFELLGNTPKIFGFLGIFLLCVTVIAFIFNFGFKFRIIGATIFSLLLSLSSWAFIQSY
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH
TQKIVIEDAKYVPIVYDNGFDLIIAKSDDDFPEESIEPTLKQLSENLRKGSRSGANVKIK
HHHHEECCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE
IRKLEKISDGVSKPVVIGEIQKNVKMN
EEHHHHHHCCCCCCEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA