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The map label for this gene is petE [H]

Identifier: 78778966

GI number: 78778966

Start: 541043

End: 541393

Strand: Reverse

Name: petE [H]

Synonym: PMT9312_0581

Alternate gene names: 78778966

Gene position: 541393-541043 (Counterclockwise)

Preceding gene: 78778967

Following gene: 78778965

Centisome position: 31.68

GC content: 40.17

Gene sequence:

>351_bases
ATGTTACGTTCAATCTTTGCAGGGTTATTCGCAATAGTTTTAACTCTAGGCCTAGGTATTTCATCAGTTTCAGCTAAGAC
TGTAGAAGTTAAACTTGGTACGGATGCAGGAATGCTTGCATTTGAACCAAGTACAGTAAACATTAGTGCTGGGGACACAG
TTAAATTCGTCAATAATAAACTTGCCCCTCACAATGCTGTTTTTGATGGACATGAGGAGTTAAGTCATGCAGACCTAGCG
TTTGCTCCAGGAGAGTCTTGGGAAGAAACATTTAATACCTCAGGAACTTATGATTACTATTGCGAGCCACACAGAGGGGC
TGGAATGGTAGGTAAAGTTATTGTTGAATAA

Upstream 100 bases:

>100_bases
TTTTAAGGCTATCAAAGTTACCAAGCTGTAATAACAATTAAAACTCTCGCAGTTAGGTTCCCTAAGCCTTGTAATATATG
TATATAAGTAAATTTTAATT

Downstream 100 bases:

>100_bases
ATCTCTAATAGTTAAGTATTTTTAATACTTATTAGAGTCATACCTAATATTTTGATTGATGAAAATAGTTCCAAGCGAAT
TTTCAAATTCTGCTTGGAAC

Product: plastocyanin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVNISAGDTVKFVNNKLAPHNAVFDGHEELSHADLA
FAPGESWEETFNTSGTYDYYCEPHRGAGMVGKVIVE

Sequences:

>Translated_116_residues
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVNISAGDTVKFVNNKLAPHNAVFDGHEELSHADLA
FAPGESWEETFNTSGTYDYYCEPHRGAGMVGKVIVE
>Mature_116_residues
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVNISAGDTVKFVNNKLAPHNAVFDGHEELSHADLA
FAPGESWEETFNTSGTYDYYCEPHRGAGMVGKVIVE

Specific function: Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I [H]

COG id: COG3794

COG function: function code C; Plastocyanin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 plastocyanin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000923
- InterPro:   IPR001235
- InterPro:   IPR008972
- InterPro:   IPR002387 [H]

Pfam domain/function: PF00127 Copper-bind [H]

EC number: NA

Molecular weight: Translated: 12337; Mature: 12337

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVNISAGDTVKFVNNK
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCEEEECCCCEEEECCCC
LAPHNAVFDGHEELSHADLAFAPGESWEETFNTSGTYDYYCEPHRGAGMVGKVIVE
CCCCCCEECCCHHCCCCCEEECCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MLRSIFAGLFAIVLTLGLGISSVSAKTVEVKLGTDAGMLAFEPSTVNISAGDTVKFVNNK
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCEEEECCCCEEEECCCC
LAPHNAVFDGHEELSHADLAFAPGESWEETFNTSGTYDYYCEPHRGAGMVGKVIVE
CCCCCCEECCCHHCCCCCEEECCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759846; 10320332 [H]