| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778948
Identifier: 78778948
GI number: 78778948
Start: 524832
End: 525515
Strand: Reverse
Name: 78778948
Synonym: PMT9312_0563
Alternate gene names: NA
Gene position: 525515-524832 (Counterclockwise)
Preceding gene: 78778949
Following gene: 78778944
Centisome position: 30.75
GC content: 26.75
Gene sequence:
>684_bases TTGTCTAAAATCTCAATTATCATTCCAACTATCAATGAAGCCAATAATTTGCCATTATTGCTTTCAGACTTGTCAATTAT TCAGAAAGAGGGCGAAATTATTATTGTTGACTGTGGTAGTGAAGATAAAACTATTGATATCGCAAATATTTATGGAGCAA AAGTATACAAATCTAAAGAAAGAAATCGAGGTTTACAATTAGATATGGGTGCCAAGCATTCAAAAGGGGACTGGCTCATT TTTTTGCATGCGGACACAAGATTAACTCATGATTGGTTTAGAAAAATAAATTCAATTTTAAAGGGAGACAAAAATTATAT TTACTATTTTAAATTTAAAATTAATCAGAAAAAGATAATTTATAGAGTTCTCGAGATTCTTGTAAATTTTAGAAGTCAAT ATTTTAAAAAACCTTATGGTGATCAAGGTTTAATAATTAATAGAAGGACTTATTTTAAGAATAATGGTTTTAGAAAGATA CCTTTAATGGAAGACGTAGATTTCTTAAGGAGATTAAATAATAAAAAAAATTTAAAACAATTAAATCTACCTATTTTCAT AAGTTCAAGAAAATGGGAAAGAACTAATATTTTTCTCCAAGCACTTAAGAACTGGAAATTTAGAAGAAGATGGTTAAAAG GAGAATCGATAAAATCTATATATTCTGACTACTACAAAAAATGA
Upstream 100 bases:
>100_bases CAATTGATAATTTTGCTTCTACAAAATTGAAATATAAGTTTTTAGATAAAAAAATAGATATAGATACGATACTTGATATT GAAAATAGAAATTAATCAAC
Downstream 100 bases:
>100_bases TTAATTTGCATACCAAAAAGCACATTTAGAACCTCTTGGTTCTAATATCCAACCTTGTCTTTTGTAAAATGTAACCACTT CCGCATCAGCAAAAAGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Cell Wall Biogenesis Glycosyltransferase; Glycosyl Transferase-Related Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferases Involved In Cell Wall Biogenesis
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSKISIIIPTINEANNLPLLLSDLSIIQKEGEIIIVDCGSEDKTIDIANIYGAKVYKSKERNRGLQLDMGAKHSKGDWLI FLHADTRLTHDWFRKINSILKGDKNYIYYFKFKINQKKIIYRVLEILVNFRSQYFKKPYGDQGLIINRRTYFKNNGFRKI PLMEDVDFLRRLNNKKNLKQLNLPIFISSRKWERTNIFLQALKNWKFRRRWLKGESIKSIYSDYYKK
Sequences:
>Translated_227_residues MSKISIIIPTINEANNLPLLLSDLSIIQKEGEIIIVDCGSEDKTIDIANIYGAKVYKSKERNRGLQLDMGAKHSKGDWLI FLHADTRLTHDWFRKINSILKGDKNYIYYFKFKINQKKIIYRVLEILVNFRSQYFKKPYGDQGLIINRRTYFKNNGFRKI PLMEDVDFLRRLNNKKNLKQLNLPIFISSRKWERTNIFLQALKNWKFRRRWLKGESIKSIYSDYYKK >Mature_226_residues SKISIIIPTINEANNLPLLLSDLSIIQKEGEIIIVDCGSEDKTIDIANIYGAKVYKSKERNRGLQLDMGAKHSKGDWLIF LHADTRLTHDWFRKINSILKGDKNYIYYFKFKINQKKIIYRVLEILVNFRSQYFKKPYGDQGLIINRRTYFKNNGFRKIP LMEDVDFLRRLNNKKNLKQLNLPIFISSRKWERTNIFLQALKNWKFRRRWLKGESIKSIYSDYYKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27152; Mature: 27021
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKISIIIPTINEANNLPLLLSDLSIIQKEGEIIIVDCGSEDKTIDIANIYGAKVYKSKE CCCEEEEEECCCCCCCCCEEEHHHHHHHCCCCEEEEECCCCCCEEEEEHHCCHHHHHCHH RNRGLQLDMGAKHSKGDWLIFLHADTRLTHDWFRKINSILKGDKNYIYYFKFKINQKKII HCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCHHHH YRVLEILVNFRSQYFKKPYGDQGLIINRRTYFKNNGFRKIPLMEDVDFLRRLNNKKNLKQ HHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCEEECCCHHHHHHHHHHCCCCCHHH LNLPIFISSRKWERTNIFLQALKNWKFRRRWLKGESIKSIYSDYYKK CCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure SKISIIIPTINEANNLPLLLSDLSIIQKEGEIIIVDCGSEDKTIDIANIYGAKVYKSKE CCEEEEEECCCCCCCCCEEEHHHHHHHCCCCEEEEECCCCCCEEEEEHHCCHHHHHCHH RNRGLQLDMGAKHSKGDWLIFLHADTRLTHDWFRKINSILKGDKNYIYYFKFKINQKKII HCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCHHHH YRVLEILVNFRSQYFKKPYGDQGLIINRRTYFKNNGFRKIPLMEDVDFLRRLNNKKNLKQ HHHHHHHHHHHHHHHCCCCCCCCEEEECEEEECCCCEEECCCHHHHHHHHHHCCCCCHHH LNLPIFISSRKWERTNIFLQALKNWKFRRRWLKGESIKSIYSDYYKK CCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA