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The map label for this gene is 78778893

Identifier: 78778893

GI number: 78778893

Start: 475380

End: 475817

Strand: Reverse

Name: 78778893

Synonym: PMT9312_0508

Alternate gene names: NA

Gene position: 475817-475380 (Counterclockwise)

Preceding gene: 78778894

Following gene: 78778892

Centisome position: 27.84

GC content: 31.28

Gene sequence:

>438_bases
ATGTTACTAAAATGGACATCAGAATTAATTATTAAAAATCTCACCAAAGCTATATCTTTTTCACTCTCCTTTATTGTTAT
TTTTACATTATTCAATTCCCCTTCTATAGCTGCAAAAACCTCAATGACTGGTGACTATACAAAAGATACAATCTCAGTTG
TTAAAACATTACAAATAGCAGTTGATACTCCAAAGGATTCTCCAAATAAAGATGAAGTAAGAAGTGAATCTCTTACCCTT
ATAACTGATTATATTTCTAGATACAGAAATAGAGGGATGGTGAACAAAACTCAATCATTTACCACAATGCAAACAGCATT
AAATGCTATGGCAGGCCATTACAAAAACTTTGCAAGTAGACCTTTACCAGATAAACTTAAAGAGCGTTTAACCAAAGAAT
TTTCTCTTGCTGAAAAAATGGTTCTAAGAGAAAGTTGA

Upstream 100 bases:

>100_bases
AATTTAAAATTAGTGCCCATAAATTGTTGGAAACATTTATTTCCGAATCAGAAATAATGTACAATAAAAATTCTTAAGGC
AAAATTTTTGGGAGCTAATT

Downstream 100 bases:

>100_bases
TACAATTCATTTACTTTTTAAAAGTAAACCAAGATTTTTGAATATATTAAATATTCGCACAAAAATAATGCTCTTCTAAA
ATTGGCTAATGTTGTTGTAA

Product: putative photosystem II reaction center Psb27 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLLKWTSELIIKNLTKAISFSLSFIVIFTLFNSPSIAAKTSMTGDYTKDTISVVKTLQIAVDTPKDSPNKDEVRSESLTL
ITDYISRYRNRGMVNKTQSFTTMQTALNAMAGHYKNFASRPLPDKLKERLTKEFSLAEKMVLRES

Sequences:

>Translated_145_residues
MLLKWTSELIIKNLTKAISFSLSFIVIFTLFNSPSIAAKTSMTGDYTKDTISVVKTLQIAVDTPKDSPNKDEVRSESLTL
ITDYISRYRNRGMVNKTQSFTTMQTALNAMAGHYKNFASRPLPDKLKERLTKEFSLAEKMVLRES
>Mature_145_residues
MLLKWTSELIIKNLTKAISFSLSFIVIFTLFNSPSIAAKTSMTGDYTKDTISVVKTLQIAVDTPKDSPNKDEVRSESLTL
ITDYISRYRNRGMVNKTQSFTTMQTALNAMAGHYKNFASRPLPDKLKERLTKEFSLAEKMVLRES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017488 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16422; Mature: 16422

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKWTSELIIKNLTKAISFSLSFIVIFTLFNSPSIAAKTSMTGDYTKDTISVVKTLQIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHH
VDTPKDSPNKDEVRSESLTLITDYISRYRNRGMVNKTQSFTTMQTALNAMAGHYKNFASR
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PLPDKLKERLTKEFSLAEKMVLRES
CCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLKWTSELIIKNLTKAISFSLSFIVIFTLFNSPSIAAKTSMTGDYTKDTISVVKTLQIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHH
VDTPKDSPNKDEVRSESLTLITDYISRYRNRGMVNKTQSFTTMQTALNAMAGHYKNFASR
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PLPDKLKERLTKEFSLAEKMVLRES
CCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]