| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is ageIM [H]
Identifier: 78778763
GI number: 78778763
Start: 358468
End: 360528
Strand: Reverse
Name: ageIM [H]
Synonym: PMT9312_0378
Alternate gene names: 78778763
Gene position: 360528-358468 (Counterclockwise)
Preceding gene: 78778764
Following gene: 78778756
Centisome position: 21.09
GC content: 34.74
Gene sequence:
>2061_bases ATGATTCATAAAAATGCAGTAGGGAAAACTGATCCTCACAGATTAAGTCCTGTAAGAGGGCCTTCATCAGAACTTGAGGC ACATGTAGATTCATGCAGTTTTGATGAACTTCCTGAATATGCAGCAAAGGTTCGATCTATAAAAAAAGAACCTTATTTTG CTGTTGACCTTTTTTCAGGTGCCGGCGGTTTAAGCCTTGGACTGCATCGTGCAAATTTTGATGTAATACTGGCCTGCGAT ATCAGAAACGATTCAATAATGACTCACAGACATCACTTTGGTGGATGCTCATATGAATGCGATTTAAGCAAAAGAAAAGT TATTAATGAAATTTCAGAACAACTTAATAAGTGTGGAGAAATATCACTTATTGCAGGTGGACCCCCATGTCAGCCTTTCT CCCGAAATATCAAATGGAGAAAACATAACGAAGAAGTTTCTGCTCAACATCAGGAACTTAATGAAGATAGAAGAGAATTA TGGGAATCATTTATTTCGATAGTGGAGCAGGTTAAACCAAAAGCTTTTCTAATGGAGAATGTTACTGATATTGCGCAGAC AGGTGAGCAGGAAATATATAGATCAATCATTAATAGAGCTGAGAAAGCTGGCTATCGCATAAATCCTAAATTAATTTATG CATGGCAATATGGAGTGCCTCAACTAAGGCCTAGATTATTTATTTCCGGAACAAAAATAAATGAATGTGCTCCTATGAAA TGGCCAAAGCCTAAATATGATTCTGTCGAAGAGGCAGTCACATTAGACGAGGCGATTTCAGATCTCCCTCCACTTAAAGG AGGATGGAATGAAAAGTGGGATGAAAAATATAGCTATGAAGGACCAAAAAACGATTATCAGAAATTAATGAGGGATTGGT TGGATATTGATGACGAGATGATTCATGATCACCTTATAAGAAAAGTTAGAGAAGATGATCTTGAGACATTTAAATTAATG CGATCAACCGGGGTCAAATATTCCCAATTATCAGAAGAGCAAAGAAGATATTCAGTTACGAGCAAAGCTTTCAGAGAAGG TAAGAAAGTAAAGCAAAATCAGAAAATGAGTTTTGGTGATAAATACAATATCCTCAAACCTAATGAACCATGTCTGACAA TAACTGCCCATATGTCAAAAGATGGTTATTGGTATATTCACCCTCACCAGAATAGAACCCTATCAGTCAGAGAAGCGGCA AGAGTTCAGTCATTTCCTGATGGTTTCAATTTTTATGGAGGGCCTTCAAATAGATTCCACCAAATTGGAGAGGCTGTTGC ACCGATTGTTGCTTTTGAACTCGGCAAATCTTTAATGAAATCAATTAAAAATGACAAAGAATTTACCCAACCTGATGTAG TGCCCAAACTTAGAGAAAATCTTATTAACTGGTATGAATCAAATAAAAAAGAAGTTGAACTTATATGGACAAAGAAAAGG GAAGGTAGAAAAATAATTCCAAGCAATATAAGGGCATGGAACGCATTTCTTGGAAATTTACTGCCAGAGACTTTTAAAAA AAACAATAAAGAAAAAAATAAACCTGCGATCTTAGGAGATAAAGATCTCGAAAAAAGGAAGAAAGATACCTACCAAAGAT TAAAAAACTTTTGGCCTACTCCTGAGATTTTTCTTCAAGATAAAGCTAGAAAAATGAAAATAAAAAGTTTTAGTCTTGAA AAATATATCCCTTCACTAGAACTGATTGCAGAAGAACTTAAAAAAGATGAAATCGACTGGAGTGAAATCACAAGAAAAGA ATATGATTTGTTCTCAAGGAATTCGGTGAGAGGAGCACTTGCTACTGTTGGATTAACCACCGAGATAAAACAATCCATAG TAATTAGCAGAATTATTTCTCAGATCATGAATATTGATTATGAAATTTTGAAATTCAGCAATATGAATAGAGATATACAT ATAGGTCATTTACTTGAAATGGATATCGAGGGGACAGGCTATTGTTCACTTCTAGCATTATCTAAAAATGAAAAAAAAGA GACCATAATTAATTCTTTTTTTAAGAACATTCAGTTTAAAGAAGTTCATAAAGCTGCTTAA
Upstream 100 bases:
>100_bases CAATAAGAAAATTAAATTCCATTGGAGGTTCAATATGTCTTGATCTTTTAAGTGAAGAACAACTCCAGCAGTTAATTGAT ACTCAGAGTGAAGAGGTCGC
Downstream 100 bases:
>100_bases ATAAATCCCTTTAGATTATTAATCTATTTTGATAACTTTTTTAAGTAATGACTTAGTAGATGAAACAAGTCCTCTATTTG ACTGTTTTATTTCATTGATA
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: M.AgeI; Cytosine-specific methyltransferase AgeI [H]
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MIHKNAVGKTDPHRLSPVRGPSSELEAHVDSCSFDELPEYAAKVRSIKKEPYFAVDLFSGAGGLSLGLHRANFDVILACD IRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRREL WESFISIVEQVKPKAFLMENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMK WPKPKYDSVEEAVTLDEAISDLPPLKGGWNEKWDEKYSYEGPKNDYQKLMRDWLDIDDEMIHDHLIRKVREDDLETFKLM RSTGVKYSQLSEEQRRYSVTSKAFREGKKVKQNQKMSFGDKYNILKPNEPCLTITAHMSKDGYWYIHPHQNRTLSVREAA RVQSFPDGFNFYGGPSNRFHQIGEAVAPIVAFELGKSLMKSIKNDKEFTQPDVVPKLRENLINWYESNKKEVELIWTKKR EGRKIIPSNIRAWNAFLGNLLPETFKKNNKEKNKPAILGDKDLEKRKKDTYQRLKNFWPTPEIFLQDKARKMKIKSFSLE KYIPSLELIAEELKKDEIDWSEITRKEYDLFSRNSVRGALATVGLTTEIKQSIVISRIISQIMNIDYEILKFSNMNRDIH IGHLLEMDIEGTGYCSLLALSKNEKKETIINSFFKNIQFKEVHKAA
Sequences:
>Translated_686_residues MIHKNAVGKTDPHRLSPVRGPSSELEAHVDSCSFDELPEYAAKVRSIKKEPYFAVDLFSGAGGLSLGLHRANFDVILACD IRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRREL WESFISIVEQVKPKAFLMENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMK WPKPKYDSVEEAVTLDEAISDLPPLKGGWNEKWDEKYSYEGPKNDYQKLMRDWLDIDDEMIHDHLIRKVREDDLETFKLM RSTGVKYSQLSEEQRRYSVTSKAFREGKKVKQNQKMSFGDKYNILKPNEPCLTITAHMSKDGYWYIHPHQNRTLSVREAA RVQSFPDGFNFYGGPSNRFHQIGEAVAPIVAFELGKSLMKSIKNDKEFTQPDVVPKLRENLINWYESNKKEVELIWTKKR EGRKIIPSNIRAWNAFLGNLLPETFKKNNKEKNKPAILGDKDLEKRKKDTYQRLKNFWPTPEIFLQDKARKMKIKSFSLE KYIPSLELIAEELKKDEIDWSEITRKEYDLFSRNSVRGALATVGLTTEIKQSIVISRIISQIMNIDYEILKFSNMNRDIH IGHLLEMDIEGTGYCSLLALSKNEKKETIINSFFKNIQFKEVHKAA >Mature_686_residues MIHKNAVGKTDPHRLSPVRGPSSELEAHVDSCSFDELPEYAAKVRSIKKEPYFAVDLFSGAGGLSLGLHRANFDVILACD IRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRREL WESFISIVEQVKPKAFLMENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMK WPKPKYDSVEEAVTLDEAISDLPPLKGGWNEKWDEKYSYEGPKNDYQKLMRDWLDIDDEMIHDHLIRKVREDDLETFKLM RSTGVKYSQLSEEQRRYSVTSKAFREGKKVKQNQKMSFGDKYNILKPNEPCLTITAHMSKDGYWYIHPHQNRTLSVREAA RVQSFPDGFNFYGGPSNRFHQIGEAVAPIVAFELGKSLMKSIKNDKEFTQPDVVPKLRENLINWYESNKKEVELIWTKKR EGRKIIPSNIRAWNAFLGNLLPETFKKNNKEKNKPAILGDKDLEKRKKDTYQRLKNFWPTPEIFLQDKARKMKIKSFSLE KYIPSLELIAEELKKDEIDWSEITRKEYDLFSRNSVRGALATVGLTTEIKQSIVISRIISQIMNIDYEILKFSNMNRDIH IGHLLEMDIEGTGYCSLLALSKNEKKETIINSFFKNIQFKEVHKAA
Specific function: This methylase recognizes the double-stranded sequence ACCGGT, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the AgeI endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI195927037, Length=464, Percent_Identity=23.9224137931034, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI4503351, Length=464, Percent_Identity=23.9224137931034, Blast_Score=106, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 79535; Mature: 79535
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00094 C5_MTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHKNAVGKTDPHRLSPVRGPSSELEAHVDSCSFDELPEYAAKVRSIKKEPYFAVDLFSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC AGGLSLGLHRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGE CCCCEEEEEECCCCEEEEEECCCCCEEEEHHHCCCCCEECCCHHHHHHHHHHHHHHCCCC ISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLMEN EEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMK HHHHHHCCHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCC WPKPKYDSVEEAVTLDEAISDLPPLKGGWNEKWDEKYSYEGPKNDYQKLMRDWLDIDDEM CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH IHDHLIRKVREDDLETFKLMRSTGVKYSQLSEEQRRYSVTSKAFREGKKVKQNQKMSFGD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KYNILKPNEPCLTITAHMSKDGYWYIHPHQNRTLSVREAARVQSFPDGFNFYGGPSNRFH CCCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHH QIGEAVAPIVAFELGKSLMKSIKNDKEFTQPDVVPKLRENLINWYESNKKEVELIWTKKR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC EGRKIIPSNIRAWNAFLGNLLPETFKKNNKEKNKPAILGDKDLEKRKKDTYQRLKNFWPT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCC PEIFLQDKARKMKIKSFSLEKYIPSLELIAEELKKDEIDWSEITRKEYDLFSRNSVRGAL CHHHHHCHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHH ATVGLTTEIKQSIVISRIISQIMNIDYEILKFSNMNRDIHIGHLLEMDIEGTGYCSLLAL HHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEEE SKNEKKETIINSFFKNIQFKEVHKAA CCCCHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MIHKNAVGKTDPHRLSPVRGPSSELEAHVDSCSFDELPEYAAKVRSIKKEPYFAVDLFSG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC AGGLSLGLHRANFDVILACDIRNDSIMTHRHHFGGCSYECDLSKRKVINEISEQLNKCGE CCCCEEEEEECCCCEEEEEECCCCCEEEEHHHCCCCCEECCCHHHHHHHHHHHHHHCCCC ISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLMEN EEEEECCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPRLFISGTKINECAPMK HHHHHHCCHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCCEEEEECCCCCCCCCCC WPKPKYDSVEEAVTLDEAISDLPPLKGGWNEKWDEKYSYEGPKNDYQKLMRDWLDIDDEM CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHH IHDHLIRKVREDDLETFKLMRSTGVKYSQLSEEQRRYSVTSKAFREGKKVKQNQKMSFGD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KYNILKPNEPCLTITAHMSKDGYWYIHPHQNRTLSVREAARVQSFPDGFNFYGGPSNRFH CCCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHH QIGEAVAPIVAFELGKSLMKSIKNDKEFTQPDVVPKLRENLINWYESNKKEVELIWTKKR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC EGRKIIPSNIRAWNAFLGNLLPETFKKNNKEKNKPAILGDKDLEKRKKDTYQRLKNFWPT CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCC PEIFLQDKARKMKIKSFSLEKYIPSLELIAEELKKDEIDWSEITRKEYDLFSRNSVRGAL CHHHHHCHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHH ATVGLTTEIKQSIVISRIISQIMNIDYEILKFSNMNRDIHIGHLLEMDIEGTGYCSLLAL HHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEEE SKNEKKETIINSFFKNIQFKEVHKAA CCCCHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8901102 [H]