Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

Click here to switch to the map view.

The map label for this gene is 78778634

Identifier: 78778634

GI number: 78778634

Start: 240089

End: 241048

Strand: Direct

Name: 78778634

Synonym: PMT9312_0249

Alternate gene names: NA

Gene position: 240089-241048 (Clockwise)

Preceding gene: 78778633

Following gene: 78778635

Centisome position: 14.05

GC content: 28.33

Gene sequence:

>960_bases
GTGGCCTGGATCTTAATTGTTTTTTTAATATTACTCGGAGGATTAATTGCACCATTTGGGGACCTCCTTGGTACAAAGAT
TGGTAAAGCTAGATTTAGTATCTTAAAATTAAGACCAAAGAAAACAGCGACAATTGTAACGATAATAACTGGAGGTTTTA
TTAGTGCAATATCTATTGGGTTATTGATTTTAGTTAGTGAAGAATTTAGGCAAAGACTTTTTGTTGATATTCCTTTTTTA
CAAAAAACTTTGGATGAGAGTAAAAAGGCGCTTCTTCCTCTCCAGGAAGAAAGGAAGAAGCTTGAAGATAAAATTAATAA
TAAAGAAAAAGAATTAAATAAATTAAAAAGTGATGTTCAAGAATTTAGAAGAGGAAATGTAGTTATTAAAAGAGGACAAA
CTTTATATATAGGACAAGTTGTTTCTAATCCAAATATAAAATTAGCTTTAGGAAAGATTTACAAAAGAGCAGATAGATAT
GTTCAGAAAATTGTAATTCCTAGTAAAAAAGAAGTAAAAAATATTCTTTTGTGGAGATCTAGTGATATAAATGAAATTGA
AGAAGTAACTGCAAAAGAAGGGAATTGGATCATATTGATCAAAGCAGCAACTAATGTTTTGAAAGGAGATAATTTTGTTT
TTGTATACCCAGAATTACTCGAAAATAAAACTATTGTGAGAAGAGGGGAAGTTATAACTAGCGAAATTCTTGAAAAAAAA
GATCTCAGCCTTCAAAATATTAATTCAACAATTAACATTTTGTTGAAAAAAACTAGAGACAAAATCAAGTTAAGGGGATC
CATCGTCAACGAAATTAATACAAAAGGGGACTTTATTAAAAAAATTAGAGACTCTATAAAGATAGGTCAAAAGAAAAAAT
ATCTATTAGAGGTTGTATCTTTAAAAGATAGTAAAACTGCAGAGATCATAATAGTTGAATTGAAAGTTACTAAAATATAA

Upstream 100 bases:

>100_bases
TATTGAAAGAAAAAAGATTACAGTATTTGATCCAATCGCTCTTTCAAAAAGATTTAATTGATTTATCATTCATTATGATG
TAATGAATGTATGAAATAGT

Downstream 100 bases:

>100_bases
TCTTTTATGTTTAAATTAATATCTATTGATCCTGGTAAATGTAAATGCGGGTTGGTAGTGGTTGATTTACATCAAAAAAA
GGTTGATCAAGCAGTTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIGLLILVSEEFRQRLFVDIPFL
QKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQEFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRY
VQKIVIPSKKEVKNILLWRSSDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK
DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVSLKDSKTAEIIIVELKVTKI

Sequences:

>Translated_319_residues
MAWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIGLLILVSEEFRQRLFVDIPFL
QKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQEFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRY
VQKIVIPSKKEVKNILLWRSSDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK
DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVSLKDSKTAEIIIVELKVTKI
>Mature_318_residues
AWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIGLLILVSEEFRQRLFVDIPFLQ
KTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQEFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRYV
QKIVIPSKKEVKNILLWRSSDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKKD
LSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVSLKDSKTAEIIIVELKVTKI

Specific function: Unknown

COG id: COG4372

COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021435 [H]

Pfam domain/function: PF11283 DUF3084 [H]

EC number: NA

Molecular weight: Translated: 36284; Mature: 36153

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHH
LLILVSEEFRQRLFVDIPFLQKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQ
HHEEECHHHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
EFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRYVQKIVIPSKKEVKNILLWRS
HHHCCCEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECC
SDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK
CCHHHHHHHHCCCCCEEEEEEECCHHHCCCCEEEECHHHHCCCHHHHCCHHHHHHHHHHH
DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVS
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LKDSKTAEIIIVELKVTKI
CCCCCCEEEEEEEEEEECC
>Mature Secondary Structure 
AWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHH
LLILVSEEFRQRLFVDIPFLQKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQ
HHEEECHHHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
EFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRYVQKIVIPSKKEVKNILLWRS
HHHCCCEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECC
SDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK
CCHHHHHHHHCCCCCEEEEEEECCHHHCCCCEEEECHHHHCCCHHHHCCHHHHHHHHHHH
DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVS
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LKDSKTAEIIIVELKVTKI
CCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840; 8391534 [H]