Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
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Accession | NC_007577 |
Length | 1,709,204 |
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The map label for this gene is 78778634
Identifier: 78778634
GI number: 78778634
Start: 240089
End: 241048
Strand: Direct
Name: 78778634
Synonym: PMT9312_0249
Alternate gene names: NA
Gene position: 240089-241048 (Clockwise)
Preceding gene: 78778633
Following gene: 78778635
Centisome position: 14.05
GC content: 28.33
Gene sequence:
>960_bases GTGGCCTGGATCTTAATTGTTTTTTTAATATTACTCGGAGGATTAATTGCACCATTTGGGGACCTCCTTGGTACAAAGAT TGGTAAAGCTAGATTTAGTATCTTAAAATTAAGACCAAAGAAAACAGCGACAATTGTAACGATAATAACTGGAGGTTTTA TTAGTGCAATATCTATTGGGTTATTGATTTTAGTTAGTGAAGAATTTAGGCAAAGACTTTTTGTTGATATTCCTTTTTTA CAAAAAACTTTGGATGAGAGTAAAAAGGCGCTTCTTCCTCTCCAGGAAGAAAGGAAGAAGCTTGAAGATAAAATTAATAA TAAAGAAAAAGAATTAAATAAATTAAAAAGTGATGTTCAAGAATTTAGAAGAGGAAATGTAGTTATTAAAAGAGGACAAA CTTTATATATAGGACAAGTTGTTTCTAATCCAAATATAAAATTAGCTTTAGGAAAGATTTACAAAAGAGCAGATAGATAT GTTCAGAAAATTGTAATTCCTAGTAAAAAAGAAGTAAAAAATATTCTTTTGTGGAGATCTAGTGATATAAATGAAATTGA AGAAGTAACTGCAAAAGAAGGGAATTGGATCATATTGATCAAAGCAGCAACTAATGTTTTGAAAGGAGATAATTTTGTTT TTGTATACCCAGAATTACTCGAAAATAAAACTATTGTGAGAAGAGGGGAAGTTATAACTAGCGAAATTCTTGAAAAAAAA GATCTCAGCCTTCAAAATATTAATTCAACAATTAACATTTTGTTGAAAAAAACTAGAGACAAAATCAAGTTAAGGGGATC CATCGTCAACGAAATTAATACAAAAGGGGACTTTATTAAAAAAATTAGAGACTCTATAAAGATAGGTCAAAAGAAAAAAT ATCTATTAGAGGTTGTATCTTTAAAAGATAGTAAAACTGCAGAGATCATAATAGTTGAATTGAAAGTTACTAAAATATAA
Upstream 100 bases:
>100_bases TATTGAAAGAAAAAAGATTACAGTATTTGATCCAATCGCTCTTTCAAAAAGATTTAATTGATTTATCATTCATTATGATG TAATGAATGTATGAAATAGT
Downstream 100 bases:
>100_bases TCTTTTATGTTTAAATTAATATCTATTGATCCTGGTAAATGTAAATGCGGGTTGGTAGTGGTTGATTTACATCAAAAAAA GGTTGATCAAGCAGTTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIGLLILVSEEFRQRLFVDIPFL QKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQEFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRY VQKIVIPSKKEVKNILLWRSSDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVSLKDSKTAEIIIVELKVTKI
Sequences:
>Translated_319_residues MAWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIGLLILVSEEFRQRLFVDIPFL QKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQEFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRY VQKIVIPSKKEVKNILLWRSSDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVSLKDSKTAEIIIVELKVTKI >Mature_318_residues AWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIGLLILVSEEFRQRLFVDIPFLQ KTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQEFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRYV QKIVIPSKKEVKNILLWRSSDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKKD LSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVSLKDSKTAEIIIVELKVTKI
Specific function: Unknown
COG id: COG4372
COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021435 [H]
Pfam domain/function: PF11283 DUF3084 [H]
EC number: NA
Molecular weight: Translated: 36284; Mature: 36153
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHH LLILVSEEFRQRLFVDIPFLQKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQ HHEEECHHHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH EFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRYVQKIVIPSKKEVKNILLWRS HHHCCCEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECC SDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK CCHHHHHHHHCCCCCEEEEEEECCHHHCCCCEEEECHHHHCCCHHHHCCHHHHHHHHHHH DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVS CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LKDSKTAEIIIVELKVTKI CCCCCCEEEEEEEEEEECC >Mature Secondary Structure AWILIVFLILLGGLIAPFGDLLGTKIGKARFSILKLRPKKTATIVTIITGGFISAISIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHH LLILVSEEFRQRLFVDIPFLQKTLDESKKALLPLQEERKKLEDKINNKEKELNKLKSDVQ HHEEECHHHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH EFRRGNVVIKRGQTLYIGQVVSNPNIKLALGKIYKRADRYVQKIVIPSKKEVKNILLWRS HHHCCCEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECC SDINEIEEVTAKEGNWIILIKAATNVLKGDNFVFVYPELLENKTIVRRGEVITSEILEKK CCHHHHHHHHCCCCCEEEEEEECCHHHCCCCEEEECHHHHCCCHHHHCCHHHHHHHHHHH DLSLQNINSTINILLKKTRDKIKLRGSIVNEINTKGDFIKKIRDSIKIGQKKKYLLEVVS CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LKDSKTAEIIIVELKVTKI CCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11759840; 8391534 [H]