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The map label for this gene is 78778624

Identifier: 78778624

GI number: 78778624

Start: 230395

End: 230844

Strand: Direct

Name: 78778624

Synonym: PMT9312_0239

Alternate gene names: NA

Gene position: 230395-230844 (Clockwise)

Preceding gene: 161350038

Following gene: 78778625

Centisome position: 13.48

GC content: 22.44

Gene sequence:

>450_bases
ATGAATAGTTTGATAGTTTATTTAGGATCTTTTTATATTGTTGTTGGCACTATATTTTTATTCGTACCGTTAATTTATCT
TGAACTAGGAAGAGAAAAAGACTTAATAAAATCTTTTTTGAATTTATTAATAGGTTTAATAATGATAATTAAAAATAAGA
CCCTAGATGAATCATTTTTTTTAATTTGTCTTTTATTTACTGTATTAGTTGTTTTATATCTAGTAGAACTTTACAGATAT
AGATGGAACCAATTGACAGATAAAGAAAAAGATAAGCTAACTACCTTTTTGGAATTCAAAAATAATCTTTCAAAAATATT
AGAGGCTATTAATCTTGGAGTTAAGAATTTTACAAAACTTTTAAATTTTTCTAATTTTGATAAAAATGATCAAAACTTGA
GTCCAAAAAAGTGGGTAAGAAATGATAAAAATGATAATATAAAAGTCTGA

Upstream 100 bases:

>100_bases
TGTGGGAGTTCAAGTCTCCCCGACCGCATTTAAGGAAATTCTAATAGTAAGTTTGTTTATAAATATCATATTCTTATAAT
TAAATTAATTAATTAATTTA

Downstream 100 bases:

>100_bases
AACCAAATTAATTGGTTATTTGAAACATGCCAAAAAAACTACAGGTCAATTAAGAAAGAATATAATAAATTAGATTTATT
TAAACAATTCTATTGATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNSLIVYLGSFYIVVGTIFLFVPLIYLELGREKDLIKSFLNLLIGLIMIIKNKTLDESFFLICLLFTVLVVLYLVELYRY
RWNQLTDKEKDKLTTFLEFKNNLSKILEAINLGVKNFTKLLNFSNFDKNDQNLSPKKWVRNDKNDNIKV

Sequences:

>Translated_149_residues
MNSLIVYLGSFYIVVGTIFLFVPLIYLELGREKDLIKSFLNLLIGLIMIIKNKTLDESFFLICLLFTVLVVLYLVELYRY
RWNQLTDKEKDKLTTFLEFKNNLSKILEAINLGVKNFTKLLNFSNFDKNDQNLSPKKWVRNDKNDNIKV
>Mature_149_residues
MNSLIVYLGSFYIVVGTIFLFVPLIYLELGREKDLIKSFLNLLIGLIMIIKNKTLDESFFLICLLFTVLVVLYLVELYRY
RWNQLTDKEKDKLTTFLEFKNNLSKILEAINLGVKNFTKLLNFSNFDKNDQNLSPKKWVRNDKNDNIKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17567; Mature: 17567

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLIVYLGSFYIVVGTIFLFVPLIYLELGREKDLIKSFLNLLIGLIMIIKNKTLDESFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LICLLFTVLVVLYLVELYRYRWNQLTDKEKDKLTTFLEFKNNLSKILEAINLGVKNFTKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LNFSNFDKNDQNLSPKKWVRNDKNDNIKV
HHCCCCCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNSLIVYLGSFYIVVGTIFLFVPLIYLELGREKDLIKSFLNLLIGLIMIIKNKTLDESFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LICLLFTVLVVLYLVELYRYRWNQLTDKEKDKLTTFLEFKNNLSKILEAINLGVKNFTKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LNFSNFDKNDQNLSPKKWVRNDKNDNIKV
HHCCCCCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA