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The map label for this gene is gatC

Identifier: 161350038

GI number: 161350038

Start: 228747

End: 229040

Strand: Direct

Name: gatC

Synonym: PMT9312_0237

Alternate gene names: 161350038

Gene position: 228747-229040 (Clockwise)

Preceding gene: 78778620

Following gene: 78778624

Centisome position: 13.38

GC content: 28.57

Gene sequence:

>294_bases
ATGATAAAAGTAACTAAAGAAGAGGTAAAAAAAGTTGCCCATTTAGCAAGATTGGAACTGAACAAGGATGAAATTAATAA
TCACGCAGAACAATTAGAAAAAATATTGGAATATATTAAACATCTTGAAAAAATTGATACTGATGATGTGCCCTGTACAA
CAAGAGCTATAGAAGTTATTAATGTATTTAGAAAAGACGATAAGAAAAATTCTGATTGCACTGAAGAGATTTTAGAGTTA
GGCCCATCTAGAGAAGATAAATACTTTAAAGTACCAAAAATTATGAATGAATGA

Upstream 100 bases:

>100_bases
AAAAGACATGATTATTTCATTTAATTATTTGAAATTTAAAAGATATATTAATAAAATATTTTAAATAAACTATTATTGAA
TAAATAACAATATGAATAGA

Downstream 100 bases:

>100_bases
ATTATTTGCTGCCTATAAAAGTTTTATTAACTATCTTTAATAAAACTTTTTTTATTTTATAGCCTGGATACAAATTTATA
ATTTTCCTTATTTTACCTCT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MIKVTKEEVKKVAHLARLELNKDEINNHAEQLEKILEYIKHLEKIDTDDVPCTTRAIEVINVFRKDDKKNSDCTEEILEL
GPSREDKYFKVPKIMNE

Sequences:

>Translated_97_residues
MIKVTKEEVKKVAHLARLELNKDEINNHAEQLEKILEYIKHLEKIDTDDVPCTTRAIEVINVFRKDDKKNSDCTEEILEL
GPSREDKYFKVPKIMNE
>Mature_97_residues
MIKVTKEEVKKVAHLARLELNKDEINNHAEQLEKILEYIKHLEKIDTDDVPCTTRAIEVINVFRKDDKKNSDCTEEILEL
GPSREDKYFKVPKIMNE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 11409; Mature: 11409

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVTKEEVKKVAHLARLELNKDEINNHAEQLEKILEYIKHLEKIDTDDVPCTTRAIEVI
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
NVFRKDDKKNSDCTEEILELGPSREDKYFKVPKIMNE
HHHHHCCCCCCCHHHHHHHCCCCCCCCCEECCHHCCC
>Mature Secondary Structure
MIKVTKEEVKKVAHLARLELNKDEINNHAEQLEKILEYIKHLEKIDTDDVPCTTRAIEVI
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
NVFRKDDKKNSDCTEEILELGPSREDKYFKVPKIMNE
HHHHHCCCCCCCHHHHHHHCCCCCCCCCEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA