Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
---|---|
Accession | NC_007577 |
Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is mpg1 [H]
Identifier: 78778540
GI number: 78778540
Start: 149998
End: 151176
Strand: Direct
Name: mpg1 [H]
Synonym: PMT9312_0154
Alternate gene names: 78778540
Gene position: 149998-151176 (Clockwise)
Preceding gene: 78778539
Following gene: 78778542
Centisome position: 8.78
GC content: 36.3
Gene sequence:
>1179_bases ATGAAGGCAATGATACTTGCGGCAGGTAAAGGTACACGTGTTCAGCCCATAACTCATATTATTCCAAAACCAATGATACC GATTCTACAAAAGCCTGTAATGGAGTTTCTTTTAGAACTCTTAAAAGAGCATGGCTTTAAAGAAATAATGGTTAATGTTT CCCATCTCGCTGAAGAAATTGAAAATTACTTTCGGGATGGTCAAAGATTCGGTGTGGAGATAGCGTATAGTTTCGAAGGT AGAATTGAAGATGGGGAATTAATTGGAGATGCTTTAGGTTCGGCAGGAGGATTAAAAAAAATTCAAGATTTCCAAAAATT CTTTGATGAAACTTTTGTTGTGCTTTGTGGAGATGCTTTAGTTGACTTAGATTTGACTGAAGCAGTTAAGAAACATAAGG AAAAGGGAGCAATTGCAAGTTTAATAACTAAAAAAGTAACTAGAGATCAGGTATCAAGTTATGGTGTAGTAGTCTCTGAT GAAAATGGTCGAATTAAGGCTTTTCAAGAAAAGCCATCTATAGATAAAGCTTTAAGTGATTCTATTAATACAGGTATTTA TCTTTTTGAACCTGAAATTTTTAATTACATACCATCAGGTGAAAAATTTGATATTGGGGCTGATCTTTTCCCTAAACTTG TTGAAATGGATTTGCCATTTTTTGCACTACCAATGGATTTCGAATGGGTGGATATTGGCAAAGTTCCTGATTATTGGAGT GCTATTCGTAATGTATTGCAAGGCAAGGTAAGACAAGTAGAAATTCCTGGCAAAGAAATTAAACCAGGGGTTTTCACCGG ATTAAATGTTGCTGCTAATTGGGATAAAGTTGATATTACCGGGCCAGTATATATAGGTGGAATGACAAGAATAGAAGATG GTGCAACAATTATTGGGCCTGCAATGATTGGTCCAAGTTGTTGTATTTGCGAGGGTGCAACAATTGATAACTCAATTATT TTCGATTATTCCAAAATTGGTAAGGGTGTTCGACTGGTGGATAAATTAGTATTTGGCCGTTACTGCGTAGGCAAAAATGG TGATCACTTTGATTTGCAAGATGCATCTTTGGATTGGTTGATAACAGATTCAAGAAGATCTGACATGACCGAGCCATCTC CACAGCAGAAGGCAATGGCGGAATTGTTAGGTACTGATTTGATTAATATTCCAGAGTAA
Upstream 100 bases:
>100_bases ATTGCCTATAGAAAATCTTGAGGCAACCAATACCTATCATTCTGCTGTTTAGGAGCTTAGTAGTAATAACGTATAATCTT TAAAAAGAGGTTTTGAATTC
Downstream 100 bases:
>100_bases GATCAGCTTTTTCAAGGATCTTAGGTATTAAATGCTCTGCCTTCACTGCCATTAGATGAATACCATTTGCGATGTTAATA AAATCATGAGCTTGCTCAGC
Product: putative sugar-phosphate nucleotidyl transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKAMILAAGKGTRVQPITHIIPKPMIPILQKPVMEFLLELLKEHGFKEIMVNVSHLAEEIENYFRDGQRFGVEIAYSFEG RIEDGELIGDALGSAGGLKKIQDFQKFFDETFVVLCGDALVDLDLTEAVKKHKEKGAIASLITKKVTRDQVSSYGVVVSD ENGRIKAFQEKPSIDKALSDSINTGIYLFEPEIFNYIPSGEKFDIGADLFPKLVEMDLPFFALPMDFEWVDIGKVPDYWS AIRNVLQGKVRQVEIPGKEIKPGVFTGLNVAANWDKVDITGPVYIGGMTRIEDGATIIGPAMIGPSCCICEGATIDNSII FDYSKIGKGVRLVDKLVFGRYCVGKNGDHFDLQDASLDWLITDSRRSDMTEPSPQQKAMAELLGTDLINIPE
Sequences:
>Translated_392_residues MKAMILAAGKGTRVQPITHIIPKPMIPILQKPVMEFLLELLKEHGFKEIMVNVSHLAEEIENYFRDGQRFGVEIAYSFEG RIEDGELIGDALGSAGGLKKIQDFQKFFDETFVVLCGDALVDLDLTEAVKKHKEKGAIASLITKKVTRDQVSSYGVVVSD ENGRIKAFQEKPSIDKALSDSINTGIYLFEPEIFNYIPSGEKFDIGADLFPKLVEMDLPFFALPMDFEWVDIGKVPDYWS AIRNVLQGKVRQVEIPGKEIKPGVFTGLNVAANWDKVDITGPVYIGGMTRIEDGATIIGPAMIGPSCCICEGATIDNSII FDYSKIGKGVRLVDKLVFGRYCVGKNGDHFDLQDASLDWLITDSRRSDMTEPSPQQKAMAELLGTDLINIPE >Mature_392_residues MKAMILAAGKGTRVQPITHIIPKPMIPILQKPVMEFLLELLKEHGFKEIMVNVSHLAEEIENYFRDGQRFGVEIAYSFEG RIEDGELIGDALGSAGGLKKIQDFQKFFDETFVVLCGDALVDLDLTEAVKKHKEKGAIASLITKKVTRDQVSSYGVVVSD ENGRIKAFQEKPSIDKALSDSINTGIYLFEPEIFNYIPSGEKFDIGADLFPKLVEMDLPFFALPMDFEWVDIGKVPDYWS AIRNVLQGKVRQVEIPGKEIKPGVFTGLNVAANWDKVDITGPVYIGGMTRIEDGATIIGPAMIGPSCCICEGATIDNSII FDYSKIGKGVRLVDKLVFGRYCVGKNGDHFDLQDASLDWLITDSRRSDMTEPSPQQKAMAELLGTDLINIPE
Specific function: Glycogen biosynthesis; first step. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=350, Percent_Identity=28.2857142857143, Blast_Score=121, Evalue=9e-28, Organism=Homo sapiens, GI11761619, Length=347, Percent_Identity=27.6657060518732, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI31881779, Length=199, Percent_Identity=30.1507537688442, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI45447090, Length=199, Percent_Identity=30.1507537688442, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789837, Length=265, Percent_Identity=25.6603773584906, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI133931050, Length=369, Percent_Identity=31.1653116531165, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17509979, Length=355, Percent_Identity=26.1971830985915, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17509981, Length=345, Percent_Identity=25.5072463768116, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320148, Length=342, Percent_Identity=28.6549707602339, Blast_Score=118, Evalue=1e-27, Organism=Drosophila melanogaster, GI21355443, Length=345, Percent_Identity=29.5652173913043, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24644084, Length=345, Percent_Identity=29.5652173913043, Blast_Score=138, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 43389; Mature: 43389
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMILAAGKGTRVQPITHIIPKPMIPILQKPVMEFLLELLKEHGFKEIMVNVSHLAEEI CCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ENYFRDGQRFGVEIAYSFEGRIEDGELIGDALGSAGGLKKIQDFQKFFDETFVVLCGDAL HHHHHCCHHCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHH VDLDLTEAVKKHKEKGAIASLITKKVTRDQVSSYGVVVSDENGRIKAFQEKPSIDKALSD CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCHHHHHHH SINTGIYLFEPEIFNYIPSGEKFDIGADLFPKLVEMDLPFFALPMDFEWVDIGKVPDYWS HCCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEECCCCCHHHH AIRNVLQGKVRQVEIPGKEIKPGVFTGLNVAANWDKVDITGPVYIGGMTRIEDGATIIGP HHHHHHCCCCEEEECCCCCCCCCEEECCCEEECCCEEECCCCEEECCCEEECCCCEEEEH AMIGPSCCICEGATIDNSIIFDYSKIGKGVRLVDKLVFGRYCVGKNGDHFDLQDASLDWL HHCCCCEEEECCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEE ITDSRRSDMTEPSPQQKAMAELLGTDLINIPE EECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKAMILAAGKGTRVQPITHIIPKPMIPILQKPVMEFLLELLKEHGFKEIMVNVSHLAEEI CCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ENYFRDGQRFGVEIAYSFEGRIEDGELIGDALGSAGGLKKIQDFQKFFDETFVVLCGDAL HHHHHCCHHCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEEECCHH VDLDLTEAVKKHKEKGAIASLITKKVTRDQVSSYGVVVSDENGRIKAFQEKPSIDKALSD CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCHHHHHHH SINTGIYLFEPEIFNYIPSGEKFDIGADLFPKLVEMDLPFFALPMDFEWVDIGKVPDYWS HCCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEECCCCCHHHH AIRNVLQGKVRQVEIPGKEIKPGVFTGLNVAANWDKVDITGPVYIGGMTRIEDGATIIGP HHHHHHCCCCEEEECCCCCCCCCEEECCCEEECCCEEECCCCEEECCCEEECCCCEEEEH AMIGPSCCICEGATIDNSIIFDYSKIGKGVRLVDKLVFGRYCVGKNGDHFDLQDASLDWL HHCCCCEEEECCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEE ITDSRRSDMTEPSPQQKAMAELLGTDLINIPE EECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]