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The map label for this gene is ndhM [H]

Identifier: 78778533

GI number: 78778533

Start: 142490

End: 142837

Strand: Direct

Name: ndhM [H]

Synonym: PMT9312_0147

Alternate gene names: 78778533

Gene position: 142490-142837 (Clockwise)

Preceding gene: 78778530

Following gene: 78778534

Centisome position: 8.34

GC content: 30.75

Gene sequence:

>348_bases
ATGGAAAAAATGCTTTTAAAATCAACTACTCGACATGTAAGAATTTTTACTGCTGAAGTTGTTGACAATGAATTACAGTT
TCATCCAAACAAACTGACTCTTGATTTAGATCCCGATAACGAGTTTATTTGGAATGAAGATTCTTTAAACGAAATAAATA
AGAAGTTTAATGAATTAATTAAAGAGAGAGCAGGAAAAGATTTAGATGATTATGAACTTCGCAAAATAGGCTCAGAGATC
GAAGGCTTAATTAAAATTTTGCTTCAAAATGGGCAATTAAGTTATAACCCAGATTGTAGAGTAATGAATTATTCCATGGG
TTTACCAAAGACAAATGAAGTGCTGTGA

Upstream 100 bases:

>100_bases
CAACACGCATTATTAAATTAATAAATAAATTAACACTTACTAATAAGCTACATTAAAGTTAGGACATTATAGTTTTTTTC
GTTGATTATTTCGCAAAATT

Downstream 100 bases:

>100_bases
ATAGACCACCCTCAAATAGAAGGCCAAGGAGAGGCTCAAATAGAAGTTACTACTCTTCAAATCCAAGAGATATGAATCCT
TATGGACAAAAAAATAGTCG

Product: NADH dehydrogenase I subunit M

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit M; NDH-1 subunit M; NDH-M [H]

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MEKMLLKSTTRHVRIFTAEVVDNELQFHPNKLTLDLDPDNEFIWNEDSLNEINKKFNELIKERAGKDLDDYELRKIGSEI
EGLIKILLQNGQLSYNPDCRVMNYSMGLPKTNEVL

Sequences:

>Translated_115_residues
MEKMLLKSTTRHVRIFTAEVVDNELQFHPNKLTLDLDPDNEFIWNEDSLNEINKKFNELIKERAGKDLDDYELRKIGSEI
EGLIKILLQNGQLSYNPDCRVMNYSMGLPKTNEVL
>Mature_115_residues
MEKMLLKSTTRHVRIFTAEVVDNELQFHPNKLTLDLDPDNEFIWNEDSLNEINKKFNELIKERAGKDLDDYELRKIGSEI
EGLIKILLQNGQLSYNPDCRVMNYSMGLPKTNEVL

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhM subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018922 [H]

Pfam domain/function: PF10664 DUF2485 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 13441; Mature: 13441

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMLLKSTTRHVRIFTAEVVDNELQFHPNKLTLDLDPDNEFIWNEDSLNEINKKFNELI
CCCCHHHCCCCEEEEEEHHHHCCCCEECCCEEEEEECCCCCEEECCCCHHHHHHHHHHHH
KERAGKDLDDYELRKIGSEIEGLIKILLQNGQLSYNPDCRVMNYSMGLPKTNEVL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MEKMLLKSTTRHVRIFTAEVVDNELQFHPNKLTLDLDPDNEFIWNEDSLNEINKKFNELI
CCCCHHHCCCCEEEEEEHHHHCCCCEECCCEEEEEECCCCCEEECCCCHHHHHHHHHHHH
KERAGKDLDDYELRKIGSEIEGLIKILLQNGQLSYNPDCRVMNYSMGLPKTNEVL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA