Definition Prochlorococcus marinus str. MIT 9312, complete genome.
Accession NC_007577
Length 1,709,204

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The map label for this gene is 78778508

Identifier: 78778508

GI number: 78778508

Start: 120090

End: 120371

Strand: Direct

Name: 78778508

Synonym: PMT9312_0122

Alternate gene names: NA

Gene position: 120090-120371 (Clockwise)

Preceding gene: 78778507

Following gene: 78778510

Centisome position: 7.03

GC content: 23.05

Gene sequence:

>282_bases
TTGTTATCAAAAATGACTCAGGAAAATAATCAAAATTACTTAAAACAAATAATTGATAATTTGTTATTAATAAACTTATT
TACAGTAATTTTTTTTGCAATATTTTTTATTTTTGCAATCATCATGCAATTAAATGGGATATTTATTTTTATTAATTTTA
TTCAGATAGTTTGGAATCCTCTTATAGTCCCATTAATAACAATTCTTATTATTGGTGCTTTACTAAACGGTATTAATTCT
TGGTGGAGGCGTAAATTGCTTTCTCAAGAAGAGGATATTTAA

Upstream 100 bases:

>100_bases
ATAAAGCTAAATAAGAGGTTTATGATCTCATGTAATGAAAATGCCAAAAAAAGACTTGGTGAAAAGAAAGCTTGTCTTAA
GATGGTTGATGATATGAATA

Downstream 100 bases:

>100_bases
AATTATAATTTTTGAGTTTACTGCTTATTACTTTTTGTCCTTCTAATACAACTTTTGCTCCATCTCCTAACAAAATTTTT
AAAACCGCCCCAGGTACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLSKMTQENNQNYLKQIIDNLLLINLFTVIFFAIFFIFAIIMQLNGIFIFINFIQIVWNPLIVPLITILIIGALLNGINS
WWRRKLLSQEEDI

Sequences:

>Translated_93_residues
MLSKMTQENNQNYLKQIIDNLLLINLFTVIFFAIFFIFAIIMQLNGIFIFINFIQIVWNPLIVPLITILIIGALLNGINS
WWRRKLLSQEEDI
>Mature_93_residues
MLSKMTQENNQNYLKQIIDNLLLINLFTVIFFAIFFIFAIIMQLNGIFIFINFIQIVWNPLIVPLITILIIGALLNGINS
WWRRKLLSQEEDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10970; Mature: 10970

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKMTQENNQNYLKQIIDNLLLINLFTVIFFAIFFIFAIIMQLNGIFIFINFIQIVWNP
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVPLITILIIGALLNGINSWWRRKLLSQEEDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSKMTQENNQNYLKQIIDNLLLINLFTVIFFAIFFIFAIIMQLNGIFIFINFIQIVWNP
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVPLITILIIGALLNGINSWWRRKLLSQEEDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA