| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is bcp [H]
Identifier: 78778467
GI number: 78778467
Start: 86467
End: 86934
Strand: Direct
Name: bcp [H]
Synonym: PMT9312_0082
Alternate gene names: 78778467
Gene position: 86467-86934 (Clockwise)
Preceding gene: 78778465
Following gene: 78778470
Centisome position: 5.06
GC content: 29.06
Gene sequence:
>468_bases ATGGCTCTTAAGGTTGGTGACAAAGCACCAGAATTTAAATTAAAAGATTCTTTTGACAAAGAAGTCTCTCTTAATGATTT TAAAGGTAAAAGAATAATACTATATTTTTATCCAAAAGATAATACTCCAGGCTGTACTAAAGAAGCCTGCAATTTTAAGG AAAATTGGGATTTACTCCAGAAAAATAATATAGTTGTTCTTGGTATCAGTAAAGATAATGCAGTTTCTCATCAGAAGTTT ATAGAAAAATTTAATTTACCTTTTATTCTTTTAACTGATCCTGAACCTTTTAAAGTTTCTTCTGATTATGACAGCTATGG ACTTAAGAAATTTATGGGAAAAGAATATATGGGAATGATGAGAAATACATTTTTGATTGATACTGACGGAAAAATTGAAA AAATCTACTTAAAGGTAAAAGCAGCAATAATGGCTGATCATATAATTGCAGACCTCCGATTACAGTAA
Upstream 100 bases:
>100_bases GCAGTTTTAATTTCCTCTATCGTTACGACATCTTGTACTCCTTTAATCTCATAAAACCAAATTTTTGGTATTTTATATTT ATACTCATTTAATAATTTCA
Downstream 100 bases:
>100_bases CTGCTAGAGAGATAGGTGGTGCATGATCATTCCTTCCATAACTAAATTAGGGGAATTGATAATATTTGTTTTCTGAGTTT TTAGATATTTTGTAAGGAAT
Product: putative bacterioferritin comigratory (BCP) protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MALKVGDKAPEFKLKDSFDKEVSLNDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQKNNIVVLGISKDNAVSHQKF IEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMMRNTFLIDTDGKIEKIYLKVKAAIMADHIIADLRLQ
Sequences:
>Translated_155_residues MALKVGDKAPEFKLKDSFDKEVSLNDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQKNNIVVLGISKDNAVSHQKF IEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMMRNTFLIDTDGKIEKIYLKVKAAIMADHIIADLRLQ >Mature_154_residues ALKVGDKAPEFKLKDSFDKEVSLNDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQKNNIVVLGISKDNAVSHQKFI EKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMMRNTFLIDTDGKIEKIYLKVKAAIMADHIIADLRLQ
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=45.0331125827815, Blast_Score=129, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322180, Length=146, Percent_Identity=31.5068493150685, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI17738015, Length=143, Percent_Identity=34.2657342657343, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17886; Mature: 17755
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKVGDKAPEFKLKDSFDKEVSLNDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQ CEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCEEE KNNIVVLGISKDNAVSHQKFIEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMM CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHCHHHHHHH RNTFLIDTDGKIEKIYLKVKAAIMADHIIADLRLQ HCEEEEECCCCEEEEEEEHHHHHHHHHHHEEEECC >Mature Secondary Structure ALKVGDKAPEFKLKDSFDKEVSLNDFKGKRIILYFYPKDNTPGCTKEACNFKENWDLLQ EEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCEEE KNNIVVLGISKDNAVSHQKFIEKFNLPFILLTDPEPFKVSSDYDSYGLKKFMGKEYMGMM CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEEECCCCCCHHHHHHCHHHHHHH RNTFLIDTDGKIEKIYLKVKAAIMADHIIADLRLQ HCEEEEECCCCEEEEEEEHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]