| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is pgm [H]
Identifier: 78778464
GI number: 78778464
Start: 82855
End: 84492
Strand: Direct
Name: pgm [H]
Synonym: PMT9312_0079
Alternate gene names: 78778464
Gene position: 82855-84492 (Clockwise)
Preceding gene: 78778463
Following gene: 78778465
Centisome position: 4.85
GC content: 32.84
Gene sequence:
>1638_bases ATGACTGAAGTTAGTGTAATAAATATCAATTCTCCCTTCTTAGATCAAAAACCCGGCACCTCTGGTTTAAGAAAAAGCAC TTTAAAGTTTCAGCAAAAAAATTATCTAGAAATTTTTATAGAAGCAATTTTACAATCACTGGAAGATTTACAAGTTTCAA CATTAGTAGTTGGTGGTGATGGCAGATATGGAAATATTGAAGCAATAGAAAAAATTGTGCAAATATGTGTTGCTCATAAA GTGCAAAAGGTTATTGTTCCAAAATGTGGTTTATTATCTACTCCTGCTACATCACATTTAATTAGAAAAGAGAATGCTAT TGGTGGCATTATTCTTTCTGCAAGTCATAATCCTGGAGGGATTGATGGTGACTTTGGAGTCAAGTTGAATATATCTAATG GTGGCCCAGCTCCTGAGATGATTACTAATAAGATATTCAAAGCTTCACAATTACTTACTAGTTATAAAATTTGTAAAATT CAACTACCAAATTTTACTGAATATGGAGCATATTCTTTCGGGGAAACTACCTTAGAAATTATTGATGGATTGAAAGATTA TTCTGATTTGATGGAGGAAATTTTTGATTTTGATCAAATTAGTGATTTTTTAAAAAAAGACTTCTCATTAATTTTCGATG CAATGAATGCGGTTACAGGCCCATATGCAACAAATATTTTTGTTGAAAAAATGGGTCTCTCAAATGATTGTGTTATGAAT GGTACTCCGTTAAAAGATTTTGGCGGTTTACATCCTGATCCCAATCTTACTTATGCTTCTCATTTAGCTGATTTATTATT AAATAAAAAATCTTATAGTTTTGGTGCTGCTTGCGATGGAGATGGCGATAGGAATATGATTCTGGGAAGTGGATGTTTTG TAAATCCTAGTGATAGCCTGGCAGTGATTACTGCTAACACCAAATGTGTCCCTGGTTATAAAGATGGTATTACAGGTGTA GCACGATCTATGCCAACTAGTTCAGCAGTTGATAACGTTGCGCGTGCATTAAATATCCCTTGTTTCGAGACACCTACTGG GTGGAAATTTTTTGGAAATCTTTTAGATTCTAATTTAATTACATTATGTGGAGAAGAAAGTTTTGGAACAGGTAGTAATC ATGTAAGGGAGAAAGATGGATTATGGGCAGTTTTGTATTGGTTACAAGTTTTAGCCGAAAAAAATTGTTCTGTAAGTGAT TTGATACAGAGTCATTGGAAACAATTTGGTAGGAATTATTATTCAAGACATGATTATGAGGCAATTCCCTCAAATATTGC TAATCAAATCTTTGGTGATCTAACTTCTAGGCTCGAAAATTTAAAAGGAAGTAATTTTGCTGGTCATTTAGTTCAAGTTG CAGATAACTTTTCATATTTAGATCCTGTGGATGATTCCATAAGTGAAAATCAAGGTTTAAGATTGATTCTTGATGATAAT TCACGCATAATTGTACGTCTTTCTGGAACTGGAACTAAGGGTGCAACATTAAGACTCTACTTTGAGAAATTTTTCAATTC TAAACAGAATCTTTCGTTAAATCCTCAAGTCGCTTTGAAACCCCTAATAGATAATTTAGATGATTTGTTAAATATTTCAA AACTTACTCAAATGCAAACTCCTACGGTAATTACATAG
Upstream 100 bases:
>100_bases TAAGCGCATTATTAATTTCTTCATTATGGTTTATCGCTATGTTAAGAACATCCGAAATGCCTCATTAATTTAGTTAGATT TTTGGAAGTATCTTAAAATT
Downstream 100 bases:
>100_bases ACTTTAAAGTAATATTTCTTGATTTAATTTATATGCATTCCGAAAATTTATTTACCAATTATTCTCAAATAGAAAGTAAT GCTCCTTTGGCAGATAAGTT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTEVSVININSPFLDQKPGTSGLRKSTLKFQQKNYLEIFIEAILQSLEDLQVSTLVVGGDGRYGNIEAIEKIVQICVAHK VQKVIVPKCGLLSTPATSHLIRKENAIGGIILSASHNPGGIDGDFGVKLNISNGGPAPEMITNKIFKASQLLTSYKICKI QLPNFTEYGAYSFGETTLEIIDGLKDYSDLMEEIFDFDQISDFLKKDFSLIFDAMNAVTGPYATNIFVEKMGLSNDCVMN GTPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSLAVITANTKCVPGYKDGITGV ARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLITLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKNCSVSD LIQSHWKQFGRNYYSRHDYEAIPSNIANQIFGDLTSRLENLKGSNFAGHLVQVADNFSYLDPVDDSISENQGLRLILDDN SRIIVRLSGTGTKGATLRLYFEKFFNSKQNLSLNPQVALKPLIDNLDDLLNISKLTQMQTPTVIT
Sequences:
>Translated_545_residues MTEVSVININSPFLDQKPGTSGLRKSTLKFQQKNYLEIFIEAILQSLEDLQVSTLVVGGDGRYGNIEAIEKIVQICVAHK VQKVIVPKCGLLSTPATSHLIRKENAIGGIILSASHNPGGIDGDFGVKLNISNGGPAPEMITNKIFKASQLLTSYKICKI QLPNFTEYGAYSFGETTLEIIDGLKDYSDLMEEIFDFDQISDFLKKDFSLIFDAMNAVTGPYATNIFVEKMGLSNDCVMN GTPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSLAVITANTKCVPGYKDGITGV ARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLITLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKNCSVSD LIQSHWKQFGRNYYSRHDYEAIPSNIANQIFGDLTSRLENLKGSNFAGHLVQVADNFSYLDPVDDSISENQGLRLILDDN SRIIVRLSGTGTKGATLRLYFEKFFNSKQNLSLNPQVALKPLIDNLDDLLNISKLTQMQTPTVIT >Mature_544_residues TEVSVININSPFLDQKPGTSGLRKSTLKFQQKNYLEIFIEAILQSLEDLQVSTLVVGGDGRYGNIEAIEKIVQICVAHKV QKVIVPKCGLLSTPATSHLIRKENAIGGIILSASHNPGGIDGDFGVKLNISNGGPAPEMITNKIFKASQLLTSYKICKIQ LPNFTEYGAYSFGETTLEIIDGLKDYSDLMEEIFDFDQISDFLKKDFSLIFDAMNAVTGPYATNIFVEKMGLSNDCVMNG TPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSLAVITANTKCVPGYKDGITGVA RSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLITLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKNCSVSDL IQSHWKQFGRNYYSRHDYEAIPSNIANQIFGDLTSRLENLKGSNFAGHLVQVADNFSYLDPVDDSISENQGLRLILDDNS RIIVRLSGTGTKGATLRLYFEKFFNSKQNLSLNPQVALKPLIDNLDDLLNISKLTQMQTPTVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=556, Percent_Identity=50.8992805755396, Blast_Score=544, Evalue=1e-155, Organism=Homo sapiens, GI21361621, Length=564, Percent_Identity=49.113475177305, Blast_Score=533, Evalue=1e-151, Organism=Homo sapiens, GI133922562, Length=556, Percent_Identity=45.3237410071942, Blast_Score=481, Evalue=1e-136, Organism=Homo sapiens, GI290463104, Length=368, Percent_Identity=50.5434782608696, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI239741729, Length=114, Percent_Identity=47.3684210526316, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI239743670, Length=114, Percent_Identity=45.6140350877193, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17535441, Length=558, Percent_Identity=46.5949820788531, Blast_Score=498, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6323752, Length=561, Percent_Identity=46.7023172905526, Blast_Score=483, Evalue=1e-137, Organism=Saccharomyces cerevisiae, GI6322722, Length=561, Percent_Identity=46.8805704099822, Blast_Score=476, Evalue=1e-135, Organism=Drosophila melanogaster, GI17864244, Length=552, Percent_Identity=48.9130434782609, Blast_Score=521, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59743; Mature: 59611
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVSVININSPFLDQKPGTSGLRKSTLKFQQKNYLEIFIEAILQSLEDLQVSTLVVGGD CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC GRYGNIEAIEKIVQICVAHKVQKVIVPKCGLLSTPATSHLIRKENAIGGIILSASHNPGG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCC IDGDFGVKLNISNGGPAPEMITNKIFKASQLLTSYKICKIQLPNFTEYGAYSFGETTLEI CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHH IDGLKDYSDLMEEIFDFDQISDFLKKDFSLIFDAMNAVTGPYATNIFVEKMGLSNDCVMN HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCEEC GTPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSL CCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCE AVITANTKCVPGYKDGITGVARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLI EEEEECCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEE TLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKNCSVSDLIQSHWKQFGRNYYSRHDYE EEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH AIPSNIANQIFGDLTSRLENLKGSNFAGHLVQVADNFSYLDPVDDSISENQGLRLILDDN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC SRIIVRLSGTGTKGATLRLYFEKFFNSKQNLSLNPQVALKPLIDNLDDLLNISKLTQMQT CEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PTVIT CCCCC >Mature Secondary Structure TEVSVININSPFLDQKPGTSGLRKSTLKFQQKNYLEIFIEAILQSLEDLQVSTLVVGGD CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC GRYGNIEAIEKIVQICVAHKVQKVIVPKCGLLSTPATSHLIRKENAIGGIILSASHNPGG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCC IDGDFGVKLNISNGGPAPEMITNKIFKASQLLTSYKICKIQLPNFTEYGAYSFGETTLEI CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHH IDGLKDYSDLMEEIFDFDQISDFLKKDFSLIFDAMNAVTGPYATNIFVEKMGLSNDCVMN HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCEEC GTPLKDFGGLHPDPNLTYASHLADLLLNKKSYSFGAACDGDGDRNMILGSGCFVNPSDSL CCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCE AVITANTKCVPGYKDGITGVARSMPTSSAVDNVARALNIPCFETPTGWKFFGNLLDSNLI EEEEECCEECCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEE TLCGEESFGTGSNHVREKDGLWAVLYWLQVLAEKNCSVSDLIQSHWKQFGRNYYSRHDYE EEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH AIPSNIANQIFGDLTSRLENLKGSNFAGHLVQVADNFSYLDPVDDSISENQGLRLILDDN HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECC SRIIVRLSGTGTKGATLRLYFEKFFNSKQNLSLNPQVALKPLIDNLDDLLNISKLTQMQT CEEEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PTVIT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]