Click here to switch to the map view.

The map label for this gene is 78778461

Identifier: 78778461

GI number: 78778461

Start: 80915

End: 81268

Strand: Direct

Name: 78778461

Synonym: PMT9312_0076

Alternate gene names: NA

Gene position: 80915-81268 (Clockwise)

Preceding gene: 78778456

Following gene: 78778462

Centisome position: 4.73

GC content: 27.4

Gene sequence:

>354_bases
ATGTCTAAACATCTTGATCCCTTTTCAAACTCTTTAAACAAGCAAACTATTCAAGAAATTGATAATTTGGATCTACCAAT
TAAGCAGAAACATCATGTAAGAATACTTGCTCATTGCCTCCAGATTTTTAAAATTATAACTGAAGATAATAGTTCTGAAT
TATGTGATAAAAATCCTCTAAGAGAATGGTGTGATAATCAATCCAAAAAATTTGATGATAAAAAATTTAGTGATCTGTTT
TATGAGCAATTAGAATCAACTGCAAAAAAGTTAAATACTTTTTCACAAAGAATAGGTAAAAATATTCAGGACTTAGAGAT
AGATGATTTAGTACTTCTAGTTGAACAAAGTTAG

Upstream 100 bases:

>100_bases
CCATGTTATCAAAAATAACTTATTACAATTAGCTTTATATACTTTAAACGAAAGATACCCCTAATATTGAGTTTTTTCCC
TTTATTAAAACTAAAAATTA

Downstream 100 bases:

>100_bases
AAATCTCCTTAAATTGATCCCGAAGAAAAAATATATTTTTGTTGAGTCGTTAACAAAATTAGGTAATAAAATTTAAAAAA
AAAGAAAATTAATTTACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MSKHLDPFSNSLNKQTIQEIDNLDLPIKQKHHVRILAHCLQIFKIITEDNSSELCDKNPLREWCDNQSKKFDDKKFSDLF
YEQLESTAKKLNTFSQRIGKNIQDLEIDDLVLLVEQS

Sequences:

>Translated_117_residues
MSKHLDPFSNSLNKQTIQEIDNLDLPIKQKHHVRILAHCLQIFKIITEDNSSELCDKNPLREWCDNQSKKFDDKKFSDLF
YEQLESTAKKLNTFSQRIGKNIQDLEIDDLVLLVEQS
>Mature_116_residues
SKHLDPFSNSLNKQTIQEIDNLDLPIKQKHHVRILAHCLQIFKIITEDNSSELCDKNPLREWCDNQSKKFDDKKFSDLFY
EQLESTAKKLNTFSQRIGKNIQDLEIDDLVLLVEQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13747; Mature: 13616

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHLDPFSNSLNKQTIQEIDNLDLPIKQKHHVRILAHCLQIFKIITEDNSSELCDKNPL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHH
REWCDNQSKKFDDKKFSDLFYEQLESTAKKLNTFSQRIGKNIQDLEIDDLVLLVEQS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SKHLDPFSNSLNKQTIQEIDNLDLPIKQKHHVRILAHCLQIFKIITEDNSSELCDKNPL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHH
REWCDNQSKKFDDKKFSDLFYEQLESTAKKLNTFSQRIGKNIQDLEIDDLVLLVEQS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA