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The map label for this gene is ycfF [C]

Identifier: 78778454

GI number: 78778454

Start: 73142

End: 73483

Strand: Reverse

Name: ycfF [C]

Synonym: PMT9312_0069

Alternate gene names: 78778454

Gene position: 73483-73142 (Counterclockwise)

Preceding gene: 78778455

Following gene: 78778453

Centisome position: 4.3

GC content: 30.99

Gene sequence:

>342_bases
ATGACTGAAACTACAATATTTCAAAAAATTCTTAATGAAGAAATCCCCTGCGATAAGCTTTATGAAGATGAGTTTTGTAT
TGCATTTAATGATATCCAGGCGCAAGCTCCAGTACATTTTTTAGTGATTCCTAAAAAGCCCATTATCAGTTTATTAGAGT
GTATTGAAAAAGATGCAAATTTATTAGGGCATTTACTATTTGTAGGTAGCAAAATAGCTAAGTCAAAAAATTTAACTAAT
TGGAGAACAGTAATTAATACCGGAGCAGAATCGGGACAAACAGTTTTTCATTTACATATTCATTTTTTATCTGGAAGAAA
AATGAATTGGCCACCAGGTTAA

Upstream 100 bases:

>100_bases
ATATTATTTGTTGATAGAGTTACATCAAAGGATGACTTAAAAAAAGAACTTATAAAAGAAGGGTTTCACGAAAAAGACGT
TATTTCGATAACTTAATTTA

Downstream 100 bases:

>100_bases
TACTCTCGAAATAAATGTTTATCGGTTATAAATAAGAAAAAAGAAAAATGAATACACCAGATTCCATAAAGACAGAATCC
AAAAATTTATTCAATTTAAT

Product: HIT (histidine triad) family protein

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTETTIFQKILNEEIPCDKLYEDEFCIAFNDIQAQAPVHFLVIPKKPIISLLECIEKDANLLGHLLFVGSKIAKSKNLTN
WRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG

Sequences:

>Translated_113_residues
MTETTIFQKILNEEIPCDKLYEDEFCIAFNDIQAQAPVHFLVIPKKPIISLLECIEKDANLLGHLLFVGSKIAKSKNLTN
WRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG
>Mature_112_residues
TETTIFQKILNEEIPCDKLYEDEFCIAFNDIQAQAPVHFLVIPKKPIISLLECIEKDANLLGHLLFVGSKIAKSKNLTNW
RTVINTGAESGQTVFHLHIHFLSGRKMNWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=53.6363636363636, Blast_Score=132, Evalue=4e-32,
Organism=Homo sapiens, GI4885413, Length=110, Percent_Identity=50.9090909090909, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=38.7387387387387, Blast_Score=85, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17506713, Length=110, Percent_Identity=47.2727272727273, Blast_Score=122, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28574010, Length=113, Percent_Identity=55.7522123893805, Blast_Score=141, Evalue=7e-35,
Organism=Drosophila melanogaster, GI24581222, Length=113, Percent_Identity=55.7522123893805, Blast_Score=141, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12818; Mature: 12687

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTIFQKILNEEIPCDKLYEDEFCIAFNDIQAQAPVHFLVIPKKPIISLLECIEKDAN
CCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LLGHLLFVGSKIAKSKNLTNWRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TETTIFQKILNEEIPCDKLYEDEFCIAFNDIQAQAPVHFLVIPKKPIISLLECIEKDAN
CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
LLGHLLFVGSKIAKSKNLTNWRTVINTGAESGQTVFHLHIHFLSGRKMNWPPG
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108129; 1472710 [H]