Click here to switch to the map view.

The map label for this gene is 78778450

Identifier: 78778450

GI number: 78778450

Start: 69580

End: 70506

Strand: Direct

Name: 78778450

Synonym: PMT9312_0065

Alternate gene names: NA

Gene position: 69580-70506 (Clockwise)

Preceding gene: 78778449

Following gene: 78778456

Centisome position: 4.07

GC content: 36.79

Gene sequence:

>927_bases
GTGGTCAATGCTAGTCTCAATTGGGCCAGTATTGTTGGTATAGTTCTCGCTGTAGGTGGAGGAGGCCTTTATTTTTTAAG
GTCTTTTAAACCTGCATTAGCAAGAGATTATGATGTTTTCTTCGCAGCAATAGGACTTTTGTGCGGAGGGATATTATTTT
TTCAAGGCTGGAGATTAGATCCTATTCTTCAGTTTGGTCAGTTTTTGTTAGCAGGAACCACAGTTTTTTTTGCATATGAA
AGTGTGCGATTAAGGGGAGTTGCTACTGATCAAGCAAGAAGATCATCTTATTTTGATGATGATCCTATTTCTGATGTGCC
CAGAAATTCTAGAGGTCGATTTAATGACGAATACGATAGGTTTGAGGAAGCTGAAAGACCATCAAGAAGATTTAACCCTC
AAGAAGATGAATTTGAAGATGAATATATGGATGGGAGATCTCTTAGAAGAAATGTTTCAAGAGCCATTCCTGCTTCTGCT
GCAAGTAGAAGCAGGCCATCTAAAAGAGAAGCAAATCAGTTTGAAAATGACGAACCTATAAGAAGAAGAAAGACTCCTGG
AGATACAAATAGTAATCAATCAGAAAGAAATAACTTTGGTGAAAGAAGAAACTTATCTCGTAATGAAGTTAAAACAGGAT
CAAGACCCAGAATAAATCGGACAGTATCTAGGCAAGATAATAGTTCTACACCTGATAATTCTTCTCAATCAAGAAAGAAA
CCTTCAAGATCTCCTATTAGGCAGCAAACTTCAACAGAGCTAGTAGAAGATGCTTCATTCAAAGATGTTAATCAAGTCAA
AAAAACTCGAGAGTCTCGGAGAGTCAGCTCTTCAGCGAGATCAAGTGCAAAAAATCAAAATGGTAGATATACCGTTGGAA
AAAATAAAAAGAAACCTAGAGATAACAGTTCTAGATTTGATGATTAA

Upstream 100 bases:

>100_bases
CATCTACTGGAAGACGCTAGTTTTTGTAGAAGTTTTAAGTACACTATATATATAGGGTGATTTAATTTCCCCTTTAAAAA
ATAAATTTTGGAGAAAGAAT

Downstream 100 bases:

>100_bases
TTATAAGATTCCTGCCCATTTTAAAAACGATTGTTGACTAAATAATTCAATTAGTATTATTGCTAGGAATCCGATCATTG
CAAATCTTCCATTAGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MVNASLNWASIVGIVLAVGGGGLYFLRSFKPALARDYDVFFAAIGLLCGGILFFQGWRLDPILQFGQFLLAGTTVFFAYE
SVRLRGVATDQARRSSYFDDDPISDVPRNSRGRFNDEYDRFEEAERPSRRFNPQEDEFEDEYMDGRSLRRNVSRAIPASA
ASRSRPSKREANQFENDEPIRRRKTPGDTNSNQSERNNFGERRNLSRNEVKTGSRPRINRTVSRQDNSSTPDNSSQSRKK
PSRSPIRQQTSTELVEDASFKDVNQVKKTRESRRVSSSARSSAKNQNGRYTVGKNKKKPRDNSSRFDD

Sequences:

>Translated_308_residues
MVNASLNWASIVGIVLAVGGGGLYFLRSFKPALARDYDVFFAAIGLLCGGILFFQGWRLDPILQFGQFLLAGTTVFFAYE
SVRLRGVATDQARRSSYFDDDPISDVPRNSRGRFNDEYDRFEEAERPSRRFNPQEDEFEDEYMDGRSLRRNVSRAIPASA
ASRSRPSKREANQFENDEPIRRRKTPGDTNSNQSERNNFGERRNLSRNEVKTGSRPRINRTVSRQDNSSTPDNSSQSRKK
PSRSPIRQQTSTELVEDASFKDVNQVKKTRESRRVSSSARSSAKNQNGRYTVGKNKKKPRDNSSRFDD
>Mature_308_residues
MVNASLNWASIVGIVLAVGGGGLYFLRSFKPALARDYDVFFAAIGLLCGGILFFQGWRLDPILQFGQFLLAGTTVFFAYE
SVRLRGVATDQARRSSYFDDDPISDVPRNSRGRFNDEYDRFEEAERPSRRFNPQEDEFEDEYMDGRSLRRNVSRAIPASA
ASRSRPSKREANQFENDEPIRRRKTPGDTNSNQSERNNFGERRNLSRNEVKTGSRPRINRTVSRQDNSSTPDNSSQSRKK
PSRSPIRQQTSTELVEDASFKDVNQVKKTRESRRVSSSARSSAKNQNGRYTVGKNKKKPRDNSSRFDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf66 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010004 [H]

Pfam domain/function: PF07444 Ycf66_N [H]

EC number: NA

Molecular weight: Translated: 35106; Mature: 35106

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNASLNWASIVGIVLAVGGGGLYFLRSFKPALARDYDVFFAAIGLLCGGILFFQGWRLD
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PILQFGQFLLAGTTVFFAYESVRLRGVATDQARRSSYFDDDPISDVPRNSRGRFNDEYDR
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
FEEAERPSRRFNPQEDEFEDEYMDGRSLRRNVSRAIPASAASRSRPSKREANQFENDEPI
HHHHHCHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCCCCCH
RRRKTPGDTNSNQSERNNFGERRNLSRNEVKTGSRPRINRTVSRQDNSSTPDNSSQSRKK
HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHCC
PSRSPIRQQTSTELVEDASFKDVNQVKKTRESRRVSSSARSSAKNQNGRYTVGKNKKKPR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
DNSSRFDD
CCCCCCCC
>Mature Secondary Structure
MVNASLNWASIVGIVLAVGGGGLYFLRSFKPALARDYDVFFAAIGLLCGGILFFQGWRLD
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PILQFGQFLLAGTTVFFAYESVRLRGVATDQARRSSYFDDDPISDVPRNSRGRFNDEYDR
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
FEEAERPSRRFNPQEDEFEDEYMDGRSLRRNVSRAIPASAASRSRPSKREANQFENDEPI
HHHHHCHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHCCCCCCH
RRRKTPGDTNSNQSERNNFGERRNLSRNEVKTGSRPRINRTVSRQDNSSTPDNSSQSRKK
HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHCC
PSRSPIRQQTSTELVEDASFKDVNQVKKTRESRRVSSSARSSAKNQNGRYTVGKNKKKPR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
DNSSRFDD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]