Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
---|---|
Accession | NC_007577 |
Length | 1,709,204 |
Click here to switch to the map view.
The map label for this gene is yieF [C]
Identifier: 78778427
GI number: 78778427
Start: 41824
End: 42348
Strand: Reverse
Name: yieF [C]
Synonym: PMT9312_0042
Alternate gene names: 78778427
Gene position: 42348-41824 (Counterclockwise)
Preceding gene: 78778428
Following gene: 78778423
Centisome position: 2.48
GC content: 30.86
Gene sequence:
>525_bases ATGACTGAATCAAAAGATCTGATTATTATTACAGCTAGTTGTGGGAAAAATCTAGAACTTTCTGAAAAATTCCTTGAAAA GAGTAATGAACTGAAAGTAAGTTCTGAAATTTTGGATCTTACCACTCTTGATATTCCACTATTTAATCCACGAATTCACA GCAAAGAAAATATTCCAGTTGAAATAGAAGAAATTAAAAAGAAGCTTTTCTCAATAGAAAAGTGGGTGATTTGTGCTCCT GAATATAATGGATCCATACCTCCTATTCTCTCCAACTTCATAGCATGGCTTTCTATTTCCGGAGATGACTTTAGAAATTT ATTTAATGGTCAACCAATTGCAATTGCAACTTTCTCTGGTGGCATAGGGTTAGAATTACTTACTTCATTACGCATTCAAT TAGTACATTTAGGAAGTCAGGTATTAGGAAGACAACTTTTATCCTCATATAGTAAACCTATAGATACAAAAACTATTGAA GATATTATTCAAAGACTTTTACAAATGAAAAAGATAAAAACATAA
Upstream 100 bases:
>100_bases ACGCAGAAGTCCTACACGGTAATATATTAAAATCCGATAGTTTAACAGCAGTTCATCACCGTAAAACTGGATCTAACTAT TAATTTTATTTATCTAATTT
Downstream 100 bases:
>100_bases ACTTTAAAAATAAAACTAAATATCAATTTTTTTCATTCCAAACTTTTAAAATTTGTCTAGCCATAGGAAGTGCATGTACA GAGCCTCCACCAGGAGTATT
Product: putative reductase
Products: NA
Alternate protein names: Flavoprotein; NADPH-Dependent FMN Reductase; FMN Reductase
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTESKDLIIITASCGKNLELSEKFLEKSNELKVSSEILDLTTLDIPLFNPRIHSKENIPVEIEEIKKKLFSIEKWVICAP EYNGSIPPILSNFIAWLSISGDDFRNLFNGQPIAIATFSGGIGLELLTSLRIQLVHLGSQVLGRQLLSSYSKPIDTKTIE DIIQRLLQMKKIKT
Sequences:
>Translated_174_residues MTESKDLIIITASCGKNLELSEKFLEKSNELKVSSEILDLTTLDIPLFNPRIHSKENIPVEIEEIKKKLFSIEKWVICAP EYNGSIPPILSNFIAWLSISGDDFRNLFNGQPIAIATFSGGIGLELLTSLRIQLVHLGSQVLGRQLLSSYSKPIDTKTIE DIIQRLLQMKKIKT >Mature_173_residues TESKDLIIITASCGKNLELSEKFLEKSNELKVSSEILDLTTLDIPLFNPRIHSKENIPVEIEEIKKKLFSIEKWVICAPE YNGSIPPILSNFIAWLSISGDDFRNLFNGQPIAIATFSGGIGLELLTSLRIQLVHLGSQVLGRQLLSSYSKPIDTKTIED IIQRLLQMKKIKT
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19539; Mature: 19408
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESKDLIIITASCGKNLELSEKFLEKSNELKVSSEILDLTTLDIPLFNPRIHSKENIPV CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCE EIEEIKKKLFSIEKWVICAPEYNGSIPPILSNFIAWLSISGDDFRNLFNGQPIAIATFSG EHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECC GIGLELLTSLRIQLVHLGSQVLGRQLLSSYSKPIDTKTIEDIIQRLLQMKKIKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TESKDLIIITASCGKNLELSEKFLEKSNELKVSSEILDLTTLDIPLFNPRIHSKENIPV CCCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCE EIEEIKKKLFSIEKWVICAPEYNGSIPPILSNFIAWLSISGDDFRNLFNGQPIAIATFSG EHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECC GIGLELLTSLRIQLVHLGSQVLGRQLLSSYSKPIDTKTIEDIIQRLLQMKKIKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA